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A factorization of an $n \times n$ nonnegative symmetric matrix $A$ of the form $BCB^T$, where $C$ is a $k \times k$ symmetric matrix, and both $B$ and $C$ are required to be nonnegative, is called the Symmetric Nonnegative Matrix…

Combinatorics · Mathematics 2024-11-14 Damjana Kokol Bukovšek , Helena Šmigoc

A symmetric positive semi-definite matrix A is called completely positive if there exists a matrix B with nonnegative entries such that A=BB^T. If B is such a matrix with a minimal number p of columns, then p is called the cp-rank of A. In…

Rings and Algebras · Mathematics 2016-04-22 Jan Brandts , Michal Krizek

Nonnegative matrix factorization (NMF) is widely used for clustering with strong interpretability. Among general NMF problems, symmetric NMF is a special one that plays an important role in graph clustering where each element measures the…

Machine Learning · Computer Science 2023-11-07 Mengyuan Zhang , Kai Liu

In this paper, we consider the symmetric multi-type non-negative matrix tri-factorization problem (SNMTF), which attempts to factorize several symmetric non-negative matrices simultaneously. This can be considered as a generalization of the…

Data Structures and Algorithms · Computer Science 2020-12-14 Rok Hribar , Timotej Hrga , Gregor Papa , Gašper Petelin , Janez Povh , Nataša Pržulj , Vida Vukašinović

A convergent algorithm for nonnegative matrix factorization with orthogonality constraints imposed on both factors is proposed in this paper. This factorization concept was first introduced by Ding et al. with intent to further improve…

Machine Learning · Computer Science 2018-11-16 Andri Mirzal

Given a symmetric nonnegative matrix $A$, symmetric nonnegative matrix factorization (symNMF) is the problem of finding a nonnegative matrix $H$, usually with much fewer columns than $A$, such that $A \approx HH^T$. SymNMF can be used for…

Numerical Analysis · Computer Science 2016-10-07 Arnaud Vandaele , Nicolas Gillis , Qi Lei , Kai Zhong , Inderjit Dhillon

Symmetric nonnegative matrix factorization (SNMF) is equivalent to computing a symmetric nonnegative low rank approximation of a data similarity matrix. It inherits the good data interpretability of the well-known nonnegative matrix…

Numerical Analysis · Computer Science 2017-10-11 Qingjiang Shi , Haoran Sun , Songtao Lu , Mingyi Hong , Meisam Razaviyayn

Semi-supervised symmetric non-negative matrix factorization (SNMF) utilizes the available supervisory information (usually in the form of pairwise constraints) to improve the clustering ability of SNMF. The previous methods introduce the…

Machine Learning · Computer Science 2024-10-29 Yuheng Jia , Jia-Nan Li , Wenhui Wu , Ran Wang

Nonnegative matrix factorization (NMF) is a popular method used to reduce dimensionality in data sets whose elements are nonnegative. It does so by decomposing the data set of interest, $\mathbf{X}$, into two lower rank nonnegative matrices…

Methodology · Statistics 2021-07-05 Phillip Shreeves , Jeffrey L. Andrews , Xinchen Deng , Ramie Ali-Adeeb , Andrew Jirasek

The nonnegative matrix factorization is a widely used, flexible matrix decomposition, finding applications in biology, image and signal processing and information retrieval, among other areas. Here we present a related matrix factorization.…

Machine Learning · Statistics 2017-12-12 David W Dreisigmeyer

Nonnegative matrix factorization (NMF) is the problem of decomposing a given nonnegative $n \times m$ matrix $M$ into a product of a nonnegative $n \times d$ matrix $W$ and a nonnegative $d \times m$ matrix $H$. A longstanding open…

Computational Complexity · Computer Science 2017-03-24 Dmitry Chistikov , Stefan Kiefer , Ines Marušić , Mahsa Shirmohammadi , James Worrell

Symmetric Nonnegative Matrix Factorization (SymNMF) is a technique in data analysis and machine learning that approximates a symmetric matrix with a product of a nonnegative, low-rank matrix and its transpose. To design faster and more…

Machine Learning · Computer Science 2024-12-02 Koby Hayashi , Sinan G. Aksoy , Grey Ballard , Haesun Park

Symmetric nonnegative matrix factorization (SNMF) has demonstrated to be a powerful method for data clustering. However, SNMF is mathematically formulated as a non-convex optimization problem, making it sensitive to the initialization of…

Machine Learning · Computer Science 2021-03-03 Yuheng Jia , Hui Liu , Junhui Hou , Sam Kwong , Qingfu Zhang

Symmetric nonnegative matrix factorization (symNMF) is a variant of nonnegative matrix factorization (NMF) that allows to handle symmetric input matrices and has been shown to be particularly well suited for clustering tasks. In this paper,…

Numerical Analysis · Mathematics 2020-03-11 François Moutier , Arnaud Vandaele , Nicolas Gillis

The nonnegative rank of a nonnegative matrix is the minimum number of nonnegative rank-one factors needed to reconstruct it exactly. The problem of determining this rank and computing the corresponding nonnegative factors is difficult;…

Optimization and Control · Mathematics 2012-08-30 Nicolas Gillis , François Glineur

This paper considers the problem of positive semidefinite factorization (PSD factorization), a generalization of exact nonnegative matrix factorization. Given an $m$-by-$n$ nonnegative matrix $X$ and an integer $k$, the PSD factorization…

Optimization and Control · Mathematics 2018-08-29 Arnaud Vandaele , François Glineur , Nicolas Gillis

Nonnegative matrix factorization (NMF) is a popular model in the field of pattern recognition. It aims to find a low rank approximation for nonnegative data M by a product of two nonnegative matrices W and H. In general, NMF is NP-hard to…

Machine Learning · Computer Science 2021-09-07 Junjun Pan , Michael K. Ng

A matrix is $k$-nonnegative if all its minors of size $k$ or less are nonnegative. We give a parametrized set of generators and relations for the semigroup of $k$-nonnegative $n\times n$ invertible matrices in two special cases: when $k =…

Combinatorics · Mathematics 2017-10-31 Sunita Chepuri , Neeraja Kulkarni , Joe Suk , Ewin Tang

This work presents a study of star covers on graphs. Unlike traditional formulations that minimize the number of stars, our aim is to optimize the number of bipartite components used in the cover. This problem, motivated by a symmetric…

Combinatorics · Mathematics 2026-05-19 Damjana Kokol Bukovšek , Polona Oblak , Helena Šmigoc

Symmetric nonnegative matrix factorization (SymNMF) is a powerful tool for clustering, which typically uses the $k$-nearest neighbor ($k$-NN) method to construct similarity matrix. However, $k$-NN may mislead clustering since the neighbors…

Machine Learning · Computer Science 2024-12-06 Wenlong Lyu , Yuheng Jia
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