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Clustering multi-dimensional points is a fundamental task in many fields, and density-based clustering supports many applications as it can discover clusters of arbitrary shapes. This paper addresses the problem of Density-Peaks Clustering…

Databases · Computer Science 2022-12-01 Daichi Amagata , Takahiro Hara

Cyber-Physical Systems (CPS) in domains such as manufacturing and energy distribution generate complex time series data crucial for Prognostics and Health Management (PHM). While Deep Learning (DL) methods have demonstrated strong…

Machine Learning · Computer Science 2025-12-16 Alexander Windmann , Henrik Steude , Daniel Boschmann , Oliver Niggemann

In this paper, the inherent gradient flow structures of thermo-poro-visco-elastic processes in porous media are examined for the first time. In the first part, a modelling framework is introduced aiming for describing such processes as…

Numerical Analysis · Mathematics 2019-11-27 Jakub Wiktor Both , Kundan Kumar , Jan Martin Nordbotten , Florin Adrian Radu

An active area of research interest is the inference of ecological models of complex microbial communities. Inferring such ecological models entails understanding the interactions between microbes and how they affect each other's growth.…

Applications · Statistics 2022-10-19 William Krinsman

Particle probability hypothesis density filtering has become a promising means for multi-target tracking due to its capability of handling an unknown and time-varying number of targets in non-linear non-Gaussian system. However, its…

Computation · Statistics 2015-03-13 Wang Junjie , Zhao Lingling , Su Xiaohong , Ma Peijun

Important computational physics problems are often large-scale in nature, and it is highly desirable to have robust and high performing computational frameworks that can quickly address these problems. However, it is no trivial task to…

Mathematical Software · Computer Science 2017-09-18 J. Chang , K. B. Nakshatrala , M. G. Knepley , L. Johnsson

The phase-field crystal (PFC) model describes crystal structures at diffusive timescales through a periodic, microscopic density field. It has been proposed to model elasticity in crystal growth and encodes most of the phenomenology related…

Materials Science · Physics 2025-01-23 Maik Punke , Marco Salvalaglio

We introduce a benchmark framework developed by and for the scientific community to evaluate, monitor and steer large language model development in fundamental physics. Building on philosophical concepts of scientific understanding and…

Data Analysis, Statistics and Probability · Physics 2025-07-30 Kristian G. Barman , Sascha Caron , Faegheh Hasibi , Eugene Shalugin , Yoris Marcet , Johannes Otte , Henk W. de Regt , Merijn Moody

The rise of big data systems has created a need for benchmarks to measure and compare the capabilities of these systems. Big data benchmarks present unique scalability challenges. The supercomputing community has wrestled with these…

Performance · Computer Science 2016-12-13 Patrick Dreher , Chansup Byun , Chris Hill , Vijay Gadepally , Bradley Kuszmaul , Jeremy Kepner

Coresets have emerged as a powerful tool to summarize data by selecting a small subset of the original observations while retaining most of its information. This approach has led to significant computational speedups but the performance of…

Statistics Theory · Mathematics 2020-12-10 Paxton Turner , Jingbo Liu , Philippe Rigollet

Simulating physical systems is a core component of scientific computing, encompassing a wide range of physical domains and applications. Recently, there has been a surge in data-driven methods to complement traditional numerical simulations…

Machine Learning · Computer Science 2021-08-19 Karl Otness , Arvi Gjoka , Joan Bruna , Daniele Panozzo , Benjamin Peherstorfer , Teseo Schneider , Denis Zorin

Discrete diffusion models are a powerful, emerging paradigm for code generation. They construct programs through iterative refinement of partially corrupted token sequences and enable parallel token refinement. Importantly, this paradigm…

Computation and Language · Computer Science 2026-05-19 Lize Shao , Michael Cardei , Zichen Xie , Ferdinando Fioretto , Wenxi Wang

Physical reservoir computing (PRC) is a computing framework that harnesses the intrinsic dynamics of physical systems for computation. It offers a promising energy-efficient alternative to traditional von Neumann computing for certain…

Computational Engineering, Finance, and Science · Computer Science 2024-10-25 Harry Youel , Daniel Prestwood , Oscar Lee , Tianyi Wei , Kilian D. Stenning , Jack C. Gartside , Will R. Branford , Karin Everschor-Sitte , Hidekazu Kurebayashi

ParticLS (\emph{Partic}le \emph{L}evel \emph{S}ets) is a software library that implements the discrete element method (DEM) and meshfree methods. ParticLS tracks the interaction between individual particles whose geometries are defined by…

Mathematical Software · Computer Science 2022-04-26 Andrew D. Davis , Brendan A. West , Nathanael J. Frisch , Devin T. O'Connor , Matthew D. Parno

Deep generative modeling provides a powerful pathway to overcome data scarcity in energy-related applications where experimental data are often limited, costly, or difficult to obtain. By learning the underlying probability distribution of…

Machine Learning · Computer Science 2025-11-21 Farah Alsafadi , Alexandra Akins , Xu Wu

This document gives a set of recommendations to build and manipulate the datasets used to develop and/or validate machine learning models such as deep neural networks. This document is one of the 3 documents defined in [1] to ensure the…

In this work, we explore the integration of Sequence Encoding for Online Parameter Identification with Physics-Informed Neural Networks to create a model that, once trained, can be utilized for real time applications with variable…

Machine Learning · Computer Science 2025-08-25 Mouad Elaarabi , Domenico Borzacchiello , Philippe Le Bot , Nathan Lauzeral , Sebastien Comas-Cardona

Standardization of data formats in a scientific discipline brings a range of benefits to researchers, as it enables the sharing of workflows and solutions to common problems, provides the foundation for generically useful tools that can be…

Accelerator Physics · Physics 2026-04-22 A. D. Brynes , J. K. Jones , M. King , M. A. Johnson , N. Ziyan

We extend the phase field crystal (PFC) framework to quantitative modeling of polycrystalline graphene. PFC modeling is a powerful multiscale method for finding the ground state configurations of large realistic samples that can be further…

Tuning of measurement models is challenging in real-world applications of sequential Monte Carlo methods. Recent advances in differentiable particle filters have led to various efforts to learn measurement models through neural networks.…

Artificial Intelligence · Computer Science 2022-03-17 Xiongjie Chen , Yunpeng Li