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Graphs, consisting of vertices and edges, are vital for representing complex relationships in fields like social networks, finance, and blockchain. Visualizing these graphs helps analysts identify structural patterns, with readability…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-11-18 Sanggeon Yun

The problem of defining a statistical ensemble of random graphs with an arbitrary connectivity distribution is discussed. Introducing such an ensemble is a step towards uderstanding the geometry of wide classes of graphs independently of…

Statistical Mechanics · Physics 2007-05-23 A. Krzywicki

We introduce a statistical mechanics formalism for the study of constrained graph evolution as a Markovian stochastic process, in analogy with that available for spin systems, deriving its basic properties and highlighting the role of the…

Disordered Systems and Neural Networks · Physics 2015-05-13 A. C. C. Coolen , A. De Martino , A. Annibale

Metric graphs are meaningful objects for modeling complex structures that arise in many real-world applications, such as road networks, river systems, earthquake faults, blood vessels, and filamentary structures in galaxies. To study metric…

Algebraic Topology · Mathematics 2018-12-14 Ellen Gasparovic , Maria Gommel , Emilie Purvine , Radmila Sazdanovic , Bei Wang , Yusu Wang , Lori Ziegelmeier

The edge-degeneracy model is an exponential random graph model that uses the graph degeneracy, a measure of the graph's connection density, and number of edges in a graph as its sufficient statistics. We show this model is relatively…

Statistics Theory · Mathematics 2016-09-19 Nicolas Kim , Dane Wilburne , Sonja Petrović , Alessandro Rinaldo

Generating graphs that are similar to real ones is an open problem, while the similarity notion is quite elusive and hard to formalize. In this paper, we focus on sparse digraphs and propose SDG, an algorithm that aims at generating graphs…

Data Structures and Algorithms · Computer Science 2018-07-06 Georgios Papoudakis , Philippe Preux , Martin Monperrus

Dynamically changing graphs are used in many applications of graph algorithms. The scope of these graphs are in graphics, communication networks and in VLSI designs where graphs are subjected to change, such as addition and deletion of…

Data Structures and Algorithms · Computer Science 2012-10-01 Megha Tyagi , Deepak Garg

Graphs are ubiquitous data structures for representing interactions between entities. With an emphasis on the use of graphs to represent chemical molecules, we explore the task of learning to generate graphs that conform to a distribution…

Machine Learning · Computer Science 2019-03-08 Qi Liu , Miltiadis Allamanis , Marc Brockschmidt , Alexander L. Gaunt

The metric dimension of a graph is the smallest number of nodes required to identify all other nodes based on shortest path distances uniquely. Applications of metric dimension include discovering the source of a spread in a network,…

Combinatorics · Mathematics 2021-04-16 Richard C. Tillquist , Rafael M. Frongillo , Manuel E. Lladser

Topological metrics of graphs provide a natural way to describe the prominent features of various types of networks. Graph metrics describe the structure and interplay of graph edges and have found applications in many scientific fields. In…

Data Structures and Algorithms · Computer Science 2018-06-21 Loukianos Spyrou , Javier Escudero

Temporal graphs are commonly used to represent time-resolved relations between entities in many natural and artificial systems. Many techniques were devised to investigate the evolution of temporal graphs by comparing their state at…

Social and Information Networks · Computer Science 2024-11-20 Lorenzo Dall'Amico , Alain Barrat , Ciro Cattuto

Graph embedding maps a graph into a convenient vector-space representation for graph analysis and machine learning applications. Many graph embedding methods hinge on a sampling of context nodes based on random walks. However, random walks…

Machine Learning · Computer Science 2021-10-18 Sadamori Kojaku , Jisung Yoon , Isabel Constantino , Yong-Yeol Ahn

Graphs are important data representations for describing objects and their relationships, which appear in a wide diversity of real-world scenarios. As one of a critical problem in this area, graph generation considers learning the…

Machine Learning · Computer Science 2022-10-06 Xiaojie Guo , Liang Zhao

We consider the problem of determining the proportion of edges that are discovered in an Erdos-Renyi graph when one constructs all shortest paths from a given source node to all other nodes. This problem is equivalent to the one of…

Statistical Mechanics · Physics 2009-11-13 Vincent D. Blondel , Jean-Loup Guillaume , Julien M. Hendrickx , Raphael M. Jungers

Random graph models are used to describe the complex structure of real-world networks in diverse fields of knowledge. Studying their behavior and fitting properties are still critical challenges, that in general, require model specific…

Statistics Theory · Mathematics 2023-08-30 Suzana de Siqueira Santos , André Fujita , Catherine Matias

We discuss a graph-based approach for testing spatial point patterns. This approach falls under the category of data-random graphs, which have been introduced and used for statistical pattern recognition in recent years. Our goal is to test…

Methodology · Statistics 2008-02-06 E. Ceyhan , C. E. Priebe , D. J. Marchette

One of the first steps in applications of statistical network analysis is frequently to produce summary charts of important features of the network. Many of these features take the form of sequences of graph statistics counting the number…

Statistics Theory · Mathematics 2025-02-14 Jonathan R. Stewart

Statistical inference for exponential-family models of random graphs with dependent edges is challenging. We stress the importance of additional structure and show that additional structure facilitates statistical inference. A simple…

Statistics Theory · Mathematics 2020-03-13 Michael Schweinberger , Jonathan Stewart

We study the expected adjacency matrix of a uniformly random multigraph with fixed degree sequence $\mathbf{d} \in \mathbb{Z}_+^n$. This matrix arises in a variety of analyses of networked data sets, including modularity-maximization and…

Social and Information Networks · Computer Science 2020-02-10 Philip S. Chodrow

Here we present the entropic dynamics formalism for networks. That is, a framework for the dynamics of graphs meant to represent a network derived from the principle of maximum entropy and the rate of transition is obtained taking into…

Physics and Society · Physics 2021-04-29 Felipe Xavier Costa , Pedro Pessoa