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We present a neural network (NN) potential based on a new set of atomic fingerprints built upon two- and three-body contributions that probe distances and local orientational order respectively. Compared to existing NN potentials, the…

Soft Condensed Matter · Physics 2023-03-22 Francesco Guidarelli Mattioli , Francesco Sciortino , John Russo

Simulating complex dynamics like fluids with traditional simulators is computationally challenging. Deep learning models have been proposed as an efficient alternative, extending or replacing parts of traditional simulators. We investigate…

Machine Learning · Computer Science 2022-03-16 Jonathan Klimesch , Philipp Holl , Nils Thuerey

We use machine learning algorithms to detect the crystalline phase in undercooled melts in molecular dynamics simulations. Our classification method is based on local conformation and environmental fingerprints of individual monomers. In…

Soft Condensed Matter · Physics 2023-11-02 Atmika Bhardwaj , Jens-Uwe Sommer , Marco Werner

We have applied recent machine learning advances, deep convolutional neural network, to three-dimensional (voxels) soft matter data, generated by Molecular Dynamics computer simulation. We have focused on the structural and phase properties…

Soft Condensed Matter · Physics 2020-10-15 Loic Dumortier , Stefano Mossa

Nanoparticles (NPs) in contact with biological fluid adsorb biomolecules into a corona. This corona comprises proteins that strongly bind to the NP (hard corona) and loosely bound proteins (soft corona) that dynamically exchange with the…

Soft Condensed Matter · Physics 2025-01-20 Oriol Vilanova , Alberto Martinez-Serra , Marco P Monopoli , Giancarlo Franzese

The coupling interactions between deformable structures and unsteady fluid flows occur across a wide range of spatial and temporal scales in many engineering applications. These fluid-structure interactions (FSI) pose significant challenges…

Fluid Dynamics · Physics 2023-12-04 Aditya G. Nair , Samuel B. Douglass , Nitish Arya

In this work we examine the nucleation from NaCl aqueous solutions within nano-confined environments, employing enhanced sampling molecular dynamics simulations integrated with machine learning-derived reaction coordinates. Through our…

Chemical Physics · Physics 2024-08-26 Ruiyu Wang , Pratyush Tiwary

We introduce a scheme based on machine learning and deep neural networks to model the environmental dependence of the electronic polarizability in insulating materials. Application to liquid water shows that training the network with a…

Chemical Physics · Physics 2020-06-24 Grace M. Sommers , Marcos F. Calegari Andrade , Linfeng Zhang , Han Wang , Roberto Car

We present in this paper a computational approach based on molecular dynamics simulations and graph theory to characterize the structure of liquid water considering not only the local structural arrangement within the first (or second)…

Soft Condensed Matter · Physics 2021-10-27 Chiara Faccio , Michele Benzi , Laura Zanetti-Polzi , Isabella Daidone

We investigate the dynamics of water confined in soft ionic nano-assemblies, an issue critical for a general understanding of the multi-scale structure-function interplay in advanced materials. We focus in particular on hydrated…

Materials Science · Physics 2017-08-23 Quentin Berrod , Samuel Hanot , Armel Guillermo , Stefano Mossa , Sandrine Lyonnard

We study the vapour-liquid phase behaviour of an ionic fluid confined in a random porous matrix formed by uncharged hard sphere particles. The ionic fluid is modelled as an equimolar binary mixture of oppositely charged equisized hard…

Soft Condensed Matter · Physics 2016-09-21 M. F. Holovko , O. Patsahan , T. Patsahan

A recent experiment [K. H. Kim, et al., Science 370, 978 (2020)] showed that it may be possible to detect a liquid-liquid phase transition (LLPT) in supercooled water by subjecting high density amorphous ice (HDA) to ultrafast heating,…

Statistical Mechanics · Physics 2021-06-24 Nicolas Giovambattista , Peter H. Poole

The wide application of machine learning (ML) techniques in statistics physics has presented new avenues for research in this field. In this paper, we introduce a semi-supervised learning method based on Siamese Neural Networks (SNN),…

Computational Physics · Physics 2025-08-18 Jianmin Shen , Shiyang Chen , Feiyi Liu , Wei Li , Youju Liu

The resolution of the Poisson equation is usually one of the most computationally intensive steps for incompressible fluid solvers. Lately, Deep Learning, and especially Convolutional Neural Networks (CNN), has been introduced to solve this…

Fluid Dynamics · Physics 2021-09-24 Ekhi Ajuria Illarramendi , Michaël Bauerheim , Bénédicte Cuenot

The machine-learning techniques have shown their capability for studying phase transitions in condensed matter physics. Here, we employ the machine-learning techniques to study the nuclear liquid-gas phase transition. We adopt an…

Nuclear Theory · Physics 2020-11-17 Rui Wang , Yu-Gang Ma , R. Wada , Lie-Wen Chen , Wan-Bing He , Huan-Ling Liu , Kai-Jia Sun

We find that a system of particles interacting through a simple isotropic potential with a softened core is able to exhibit a rich phase behavior including: a liquid-liquid phase transition in the supercooled phase, as has been suggested…

Soft Condensed Matter · Physics 2009-10-31 G. Malescio , G. Pellicane

We use a lattice model of a ternary mixture containing saturated and unsaturated lipids with cholesterol (Chol), to study the structural properties characterizing the coexistence between the liquid-disordered and liquid-ordered phases.…

Soft Condensed Matter · Physics 2023-10-24 Tanmoy Sarkar , Oded Farago

Prediction of solubility has been a complex and challenging physiochemical problem that has tremendous implications in the chemical and pharmaceutical industry. Recent advancements in machine learning methods have provided great scope for…

Disordered Systems and Neural Networks · Physics 2024-02-20 Vansh Ramani , Tarak Karmakar

Diffusion involving atom transport from one location to another governs many important processes and behaviors such as precipitation and phase nucleation. Local chemical complexity in compositionally complex alloys poses challenges for…

Disordered Systems and Neural Networks · Physics 2024-05-10 Bin Xing , Timothy J. Rupert , Xiaoqing Pan , Penghui Cao

The dynamics of droplet collisions in microchannels are inherently complex, governed by multiple interdependent physical and geometric factors. Understanding and predicting the outcomes of these collisions-whether coalescence, reverse-back,…

Fluid Dynamics · Physics 2024-11-12 SM Abdullah Al Mamun , Samaneh Farokhirad