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We define a cellular automaton where a resting cell excites if number of its excited neighbours belong to some specified interval and boundaries of the interval change depending on ratio of excited and refractory neighbours in the cell's…

Cellular Automata and Lattice Gases · Physics 2013-02-27 Andrew Adamatzky

Actin filaments, crosslinkers and myosin molecular motors form contractile networks. For instance, the cell cortex is a thin network below the cell membrane ; contraction of the cell cortex allows cells to round up during cell division.…

We propose a three dimensional mechanical model of embryonic tissue dynamics. Mechanically coupled adherent cells are represented as particles interconnected with elastic beams which can exert non-central forces and torques. Tissue…

Biological Physics · Physics 2015-06-22 Andras Czirok , Dona Greta Isai

Macroscopic properties and shapes of biological tissues depend on the remodelling of cell-cell junctions at the microscopic scale. We propose a theoretical framework that couples a vertex model of solid confluent tissues with the dynamics…

Soft Condensed Matter · Physics 2020-12-02 Clement Zankoc , Matej Krajnc

It is known that mechanical interactions couple a cell to its neighbors, enabling a feedback loop to regulate tissue growth. However, the interplay between cell-cell adhesion strength, local cell density and force fluctuations in regulating…

Soft Condensed Matter · Physics 2020-02-12 Abdul Malmi-Kakkada , Xin Li , Sumit Sinha , D. Thirumalai

Migratory and tissue resident cells exhibit highly branched morphologies to perform their function and to adapt to the microenvironment. Immune cells, for example, display transient branched shapes while exploring the surrounding tissues.…

Biological Physics · Physics 2024-04-02 Jiayi Liu , Javier Boix-Campos , Jonathan E. Ron , Johan M. Kux , Nir S. Gov , Pablo J. Sáez

We develop a microscopic biophysical model for self-organization and reshaping of artificial tissue, that is co-driven by microscopic active forces between cells and extracellular matrix (ECM), and macroscopic forces that develop within the…

Biological Physics · Physics 2020-11-18 J. P. Hague , P. W. Mieczkowski , C. O'Rourke , A. J. Loughlin , J. B. Phillips

We analyse a generic motility model, with the motility mechanism arising by contractile stress due to the interaction of myosin and actin. A hydrodynamic active polar gel theory is used to model the cytoplasm of a cell and is combined with…

Cell Behavior · Quantitative Biology 2015-07-06 Wieland Marth , Simon Praetorius , Axel Voigt

Local stresses in a tissue, a collective property, regulate cell division and apoptosis. In turn, cell growth and division induce active stresses in the tissue. As a consequence, there is a feedback between cell growth and local stresses.…

Soft Condensed Matter · Physics 2024-05-06 Sumit Sinha , Xin Li , Abdul N Malmi-Kakkada , D. Thirumalai

Actin and myosin drive many instances of force generation, deformation, and shape change in cells, tissues, and organisms. In particular, cytoskeletal actomyosin is remarkable in its adaptive architecture, responding to a host of…

Soft Condensed Matter · Physics 2025-12-18 James Clarke , Hyunjae Lee , Kyla Wong , Julia Glenn , Aniket Marne , Yoichi Miyahara , José Alvarado

The one-dimensional crawling movement of a cell is considered in this theoretical study. Our active gel model shows that for a cell with weakly mechanosensitive adhesion complexes, as myosin contractility increases, a cell starts to move at…

Soft Condensed Matter · Physics 2023-01-05 Jen-Yu Lo , Yuan-Heng Tseng , Hsuan-Yi Chen

The production of mechanical stresses in living organisms largely relies on localized, force-generating active units embedded in filamentous matrices. Numerical simulations of discrete fiber networks with fixed boundaries have shown that…

Biological Physics · Physics 2018-05-10 Pierre Ronceray , Chase Broedersz , Martin Lenz

Cooperative action of molecular motors is essential for many cellular processes. One possible regulator of motor coordination is the elasticity-mediated crosstalk (EMC) coupling between myosin II motors whose origin is the tensile stress…

Biological Physics · Physics 2015-06-15 Nadiv Dharan , Oded Farago

Tissue-scale shape changes are driven by ensembles of intracellular forces. However measuring force in these contexts remains a difficult challenge. Here we perform spectral analysis of transverse fluctuations of cell-cell junctions in…

Soft Condensed Matter · Physics 2026-05-13 Brian Huynh , Shinuo Weng , José Alvarado

The macroscopic behaviour of active matter arises from nonequilibrium microscopic processes. In soft materials, active stresses typically drive macroscopic shape changes, which in turn alter the geometry constraining the microscopic…

Soft Condensed Matter · Physics 2024-11-26 Tim Dullweber , Roman Belousov , Anna Erzberger

Many morphogenetic processes involve mechanical rearrangement of epithelial tissues that is driven by precisely regulated cytoskeletal forces and cell adhesion. The mechanical state of the cell and intercellular adhesion are not only the…

Cell Behavior · Quantitative Biology 2015-06-03 Kevin K. Chiou , Lars Hufnagel , Boris I. Shraiman

We propose a statistical model of a large random network with high connectivity in order to describe the behavior of {\it E.\,coli} cells after exposure to acute stress. The building blocks of this network are feedback cycles typical of the…

Disordered Systems and Neural Networks · Physics 2022-02-22 S. Reich , S. Maoz , Y. Kaplan , H. Rappeport , N. Q. Balaban , O. Agam

Shape transformations of epithelial tissues in three dimensions, which are crucial for embryonic development or in vitro organoid growth, can result from active forces generated within the cytoskeleton of the epithelial cells. How the…

Biological Physics · Physics 2024-12-23 Diana Khoromskaia , Guillaume Salbreux

Actin flow in the cortical cytoskeleton underneath the cell membrane generates mechanical stresses that shape the cell surface. We study this mechanism using a hydrodynamic model of a compressible active gel polymerizing at the membrane and…

Soft Condensed Matter · Physics 2026-05-13 Kristiana Mihali , Dennis Wörthmüller , Pierre Sens

Cells in an epithelial monolayer coordinate motion with their neighbors giving rise to collectively moving packs of sizes spanning multiple cell diameters. The physical mechanism controlling the pack size, however, remains unclear. A…

Biological Physics · Physics 2021-07-21 Aashrith Saraswathibhatla , Silke Henkes , Emmett E. Galles , Rastko Sknepnek , Jacob Notbohm
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