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Multiple-merger coalescents, e.g. $\Lambda$-$n$-coalescents, have been proposed as models of the genealogy of $n$ sampled individuals for a range of populations whose genealogical structures are not captured well by Kingman's…

Probability · Mathematics 2021-04-19 Fabian Freund

Sweepstakes reproduction refers to a highly skewed individual recruitment success without involving natural selection and may apply to individuals in broadcast spawning populations characterised by Type III survivorship. We consider an…

Populations and Evolution · Quantitative Biology 2026-01-14 Jonathan A Chetwynd-Diggle , Bjarki Eldon

Consider a population evolving as a critical continuous-time Galton-Watson (GW) tree. Conditional on the population surviving until a large time $T$, sample $k$ individuals uniformly at random (without replacement) from amongst those alive…

Probability · Mathematics 2023-02-07 Simon C. Harris , Samuel G. G. Johnston , Juan Carlos Pardo

Widely used models in genetics include the Wright-Fisher diffusion and its moment dual, Kingman's coalescent. Each has a multilocus extension but under neither extension is the sampling distribution available in closed-form, and their…

Probability · Mathematics 2015-06-24 Paul A. Jenkins , Paul Fearnhead , Yun S. Song

Wright-Fisher diffusions describe the evolution of the type composition of an infinite haploid population with two types (say type $0$ and type $1$) subject to neutral reproductions, and possibly selection and mutations. In the present…

Probability · Mathematics 2022-12-21 Grégoire Véchambre

We investigate the genealogy of a sample of $k\geq1$ particles chosen uniformly without replacement from a population alive at large times in a critical discrete-time Galton-Watson process in a varying environment (GWVE). We will show that…

Probability · Mathematics 2024-03-04 Simon C. Harris , Sandra Palau , Juan Carlos Pardo

In a randomly-mating biparental population of size $N$ there are, with high probability, individuals who are genealogical ancestors of every extant individual within approximately $\log_2(N)$ generations into the past. We use this result of…

Populations and Evolution · Quantitative Biology 2015-03-03 Simon Gravel , Mike Steel

In populations competing for resources, it is natural to ask whether consuming fewer resources provides any selective advantage. To answer this question, we propose a Wright- Fisher model with two types of individuals: the inefficient…

Probability · Mathematics 2020-09-11 Adrian Gonzalez Casanova , Veronica Miro Pina , Juan Carlos Pardo

We consider diploid bi-parental analogues of Cannings models: in a population of fixed size $N$ the next generation is composed of $V_{i,j}$ offspring from parents $i$ and $j$, where $V=(V_{i,j})_{1\le i\neq j \le N}$ is a (jointly)…

Probability · Mathematics 2018-03-29 Matthias Birkner , Huili Liu , Anja Sturm

This article considers a model of genealogy corresponding to a regular exchangeable coalescent (also known as Xi-coalescent) started from a large finite configuration, and undergoing neutral mutations. Asymptotic expressions for the number…

Probability · Mathematics 2011-08-04 Vlada Limic

A number of discrete time, finite population size models in genetics describing the dynamics of allele frequencies are known to converge (subject to suitable scaling) to a diffusion process in the infinite population limit, termed the…

Probability · Mathematics 2021-09-14 Jaromir Sant , Paul A. Jenkins , Jere Koskela , Dario Spano

A two-types, discrete-time population model with finite, constant size is constructed, allowing for a general form of frequency-dependent selection and skewed offspring distribution. Selection is defined based on the idea that individuals…

Probability · Mathematics 2017-04-13 Adrián González Casanova , Dario Spanò

We consider a model of random tree growth, where at each time unit a new vertex is added and attached to an already existing vertex chosen at random. The probability with which a vertex with degree $k$ is chosen is proportional to $w(k)$,…

Probability · Mathematics 2007-05-23 Anna Rudas , Balint Toth , Benedek Valko

The classical model for the genealogies of a neutrally evolving population in a fixed environment is due to Kingman. Kingman's coalescent process, which produces a binary tree, universally emerges from many microscopic models in which the…

Populations and Evolution · Quantitative Biology 2023-12-05 Ethan Levien

A multi-type neutral Cannings population model with mutation and fixed subpopulation sizes is analyzed. Under appropriate conditions, as all subpopulation sizes tend to infinity, the ancestral process, properly time-scaled, converges to a…

Probability · Mathematics 2023-04-13 Martin Möhle

The correlation among the gene genealogies at different loci is crucial in biology, yet challenging to understand because such correlation depends on many factors including genetic linkage, recombination, natural selection and population…

Probability · Mathematics 2023-10-20 David Kogan , Dimitrios Diamantidis , John Wakeley , Wai-Tong Louis Fan

We study a generalization of the Wright--Fisher model in which some individuals adopt a behavior that is harmful to others without any direct advantage for themselves. This model is motivated by studies of spiteful behavior in nature,…

Probability · Mathematics 2015-03-18 Ludovic Goudenège , Pierre-André Zitt

The Wright-Fisher model and the Moran model are both widely used in population genetics. They describe the time evolution of the frequency of an allele in a well-mixed population with fixed size. We propose a simple and tractable model…

Populations and Evolution · Quantitative Biology 2024-12-30 Arthur Alexandre , Alia Abbara , Cecilia Fruet , Claude Loverdo , Anne-Florence Bitbol

We consider the set of random Bienaym\'e-Galton-Watson trees with a bounded number of offspring and bounded number of generations as a statistical mechanics model: a random tree is a rooted subtree of the maximal tree; the spin at a given…

Mathematical Physics · Physics 2022-10-26 Francois Dunlop , Arif Mardin

We study the genealogy of a sample of $k$ individuals taken uniformly without replacement from a continuous-time multitype Bienaym\'e--Galton--Watson process at fixed times. Our results are quite general, requiring only that the process be…

Probability · Mathematics 2026-05-13 Osvaldo Angtuncio Hernández , Juan Carlos Pardo , Simon C. Harris