English
Related papers

Related papers: Engineered Bacteria Computationally Solve Chemical…

200 papers

Bacterial cells navigate around their environment by directing their movement along chemical gradients. This process, known as chemotaxis, can promote the rapid expansion of bacterial populations into previously unoccupied territories.…

Populations and Evolution · Quantitative Biology 2022-06-08 Avaneesh V. Narla , Jonas Cremer , Terry Hwa

We propose a non-commutative algorithm for multiplying 2x2 matrices using 7 coefficient products. This algorithm reaches simultaneously a better accuracy in practice compared to previously known such fast algorithms, and a time complexity…

Numerical Analysis · Mathematics 2024-07-01 Jean-Guillaume Dumas , Clément Pernet , Alexandre Sedoglavic

Open cloze questions have been attracting attention for both measuring the ability and facilitating the learning of L2 English learners. In spite of its benefits, the open cloze test has been introduced only sporadically on the educational…

Computers and Society · Computer Science 2023-02-09 Shoya Matsumori , Kohei Okuoka , Ryoichi Shibata , Minami Inoue , Yosuke Fukuchi , Michita Imai

Computational problems can be classified according to their algorithmic complexity, which is defined based on how the resources needed to solve the problem, e.g. the execution time, scale with the problem size. Many problems in…

Computational Complexity · Computer Science 2021-07-29 Davide Cirillo , Miguel Ponce-de-Leon , Alfonso Valencia

The distributed matrix multiplication problem with an unknown number of stragglers is considered, where the goal is to efficiently and flexibly obtain the product of two massive matrices by distributing the computation across N servers.…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-07-23 Weiqi Li , Zhen Chen , Zhiying Wang , Syed A. Jafar , Hamid Jafarkhani

We enumerate the number of 0/1-matrices avoiding 2x2 submatrices satisfying certain conditions. We also provide corresponding exponential generating functions.

Combinatorics · Mathematics 2011-12-30 Hyeong-Kwan Ju , Seunghyun Seo

Randomly moving active particles can be herded into directed motion by asymmetric geometric structures. Although such a rectification process has been extensively studied due to its fundamental, biological, and technological relevance, a…

Soft Condensed Matter · Physics 2026-03-31 Satyam Anand , Xiaolei Ma , Shuo Guo , Stefano Martiniani , Xiang Cheng

Background: Living cells of many types need to move in response to external stimuli in order to accomplish their functional tasks; these tasks range from wound healing to immune response to fertilization. While the directional motion is…

Cell Behavior · Quantitative Biology 2015-05-28 Inbal Hecht , Herbert Levine , Wouter-Jan Rappel , Eshel Ben-Jacob

Bio-inspired algorithms utilize natural processes such as evolution, swarm behavior, foraging, and plant growth to solve complex, nonlinear, high-dimensional optimization problems. However, a plethora of these algorithms require a more…

The present study aimed to solve the cure optimization problem of laminated composites through a statistical approach. The approach consisted of using constrained Bayesian Optimization (cBO) along with a Gaussian process model as a…

Applications · Statistics 2025-06-02 Madhura Limaye , Yezhuo Li , Qiong Zhang , Gang Li

Most experimental studies initialize the population of evolutionary algorithms with random genotypes. In practice, however, optimizers are typically seeded with good candidate solutions either previously known or created according to some…

Neural and Evolutionary Computing · Computer Science 2014-12-02 Tobias Friedrich , Markus Wagner

Motile bacteria can migrate along chemical gradients in a process known as chemotaxis. When exposed to uniform environmental stress, Escherichia coli cells coordinate their chemotactic responses to form millimeter-sized condensates…

Biological Physics · Physics 2025-05-02 Nir Livne , Ady Vaknin , Oded Agam

Traditional symbolic reasoning engines, while attractive for their precision and explicability, have a few major drawbacks: the use of brittle inference procedures that rely on exact matching (unification) of logical terms, an inability to…

Computation and Language · Computer Science 2021-12-07 Aditya Kalyanpur , Tom Breloff , David Ferrucci

In this paper we propose a novel algorithm to combine two or more cellular complexes, providing a minimal fragmentation of the cells of the resulting complex. We introduce here the idea of arrangement generated by a collection of cellular…

Computational Geometry · Computer Science 2017-08-29 Alberto Paoluzzi , Vadim Shapiro , Antonio DiCarlo

We explain how the prototype automatic chess problem composer, Chesthetica, successfully composed a rare and interesting chess problem using the new Digital Synaptic Neural Substrate (DSNS) computational creativity approach. This problem…

Artificial Intelligence · Computer Science 2017-09-05 Azlan Iqbal

The exponential growth of the power of modern digital computers is based upon the miniaturisation of vast nanoscale arrays of electronic switches, but this will be eventually constrained by fabrication limits and power dissipation. Chemical…

Emerging Technologies · Computer Science 2022-04-29 Abhishek Sharma , Marcus Tze-Kiat Ng , Juan Manuel Parrilla Gutierrez , Yibin Jiang , Leroy Cronin

Tiling models are classical statistical models in which different geometric shapes, the tiles, are packed together such that they cover space completely. In this paper we discuss a class of two-dimensional tiling models in which the tiles…

Statistical Mechanics · Physics 2015-06-24 Bernard Nienhuis

We investigate the ability of a genetic algorithm to design cellular automata that perform computations. The computational strategies of the resulting cellular automata can be understood using a framework in which ``particles'' embedded in…

adap-org · Physics 2015-06-30 James P. Crutchfield , Melanie Mitchell , Rajarshi Das

Binary embeddings provide efficient and powerful ways to perform operations on large scale data. However binary embedding typically requires long codes in order to preserve the discriminative power of the input space. Thus binary coding…

Data Structures and Algorithms · Computer Science 2015-12-08 Felix X. Yu , Aditya Bhaskara , Sanjiv Kumar , Yunchao Gong , Shih-Fu Chang

How do mammalian cells that share the same genome exist in notably distinct phenotypes, exhibiting differences in morphology, gene expression patterns, and epigenetic chromatin statuses? Furthermore how do cells of different phenotypes…

Molecular Networks · Quantitative Biology 2015-04-27 Jianhua Xing , Jin Yu , Hang Zhang , Xiao-Jun Tian