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We present efforts at improving the performance of FLASH, a multi-scale, multi-physics simulation code principally for astrophysical applications, by using huge pages on Ookami, an HPE Apollo 80 A64FX platform. FLASH is written principally…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-07-28 Alan C. Calder , Catherine Feldman , Eva Siegmann , John Dey , Anthony Curtis , Smeet Chheda , Robert J. Harrison

We ported the firmware of the ARTIQ experiment control infrastructure to an embedded system based on a commercial Xilinx Zynq-7000 system-on-chip. It contains high-performance hardwired CPU cores integrated with FPGA fabric. As with…

Instrumentation and Detectors · Physics 2021-12-01 Chun Kit Lam , Stephan Maka , David Nadlinger , Chris Ballance , Sébastien Bourdeauducq

This paper discusses the challenges encountered when analyzing the energy efficiency of synthetic benchmarks and the Gromacs package on the Fritz and Alex HPC clusters. Experiments were conducted using MPI parallelism on full sockets of…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-12-04 Rafael Ravedutti Lucio Machado , Jan Eitzinger , Georg Hager , Gerhard Wellein

Factorization and multiplication of dense matrices and tensors are critical, yet extremely expensive pieces of the scientific toolbox. Careful use of low rank approximation can drastically reduce the computation and memory requirements of…

Performance · Computer Science 2023-11-15 Sameer Deshmukh , Rio Yokota , George Bosilca

We show that efficient simulations of the Kardar-Parisi-Zhang interface growth in 2 + 1 dimensions and of the 3-dimensional Kinetic Monte Carlo of thermally activated diffusion can be realized both on GPUs and modern CPUs. In this article…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-01-21 Jeffrey Kelling , Géza Ódor , Máté Ferenc Nagy , Henrik Schulz , Karl-Heinz Heinig

We present a new library for parallel distributed Fast Fourier Transforms (FFT). The importance of FFT in science and engineering and the advances in high performance computing necessitate further improvements. AccFFT extends existing FFT…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-05-27 Amir Gholami , Judith Hill , Dhairya Malhotra , George Biros

The rapid advancements in artificial intelligence (AI), particularly the Large Language Models (LLMs), have profoundly affected our daily work and communication forms. However, it is still a challenge to deploy LLMs on resource-constrained…

Hardware Architecture · Computer Science 2025-03-03 Mingqiang Huang , Ao Shen , Kai Li , Haoxiang Peng , Boyu Li , Yupeng Su , Hao Yu

The HPC community shows a keen interest in creating diversity in the CPU ecosystem. The advent of Arm-based processors provides an alternative to the existing HPC ecosystem, which is primarily dominated by x86 processors. In this paper, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-26 Nikunj Gupta , Rohit Ashiwal , Bine Brank , Sateesh K. Peddoju , Dirk Pleiter

Graphics processing units (GPUs) are recently being used to an increasing degree for general computational purposes. This development is motivated by their theoretical peak performance, which significantly exceeds that of broadly available…

Computational Physics · Physics 2015-03-17 Martin Weigel

An existing hybrid MPI-OpenMP scheme is augmented with a CUDA-based fine grain parallelization approach for multidimensional distributed Fourier transforms, in a well-characterized pseudospectral fluid turbulence code. Basics of the hybrid…

Computational Physics · Physics 2018-08-07 Duane Rosenberg , Pablo D. Mininni , Raghu Reddy , Annick Pouquet

The rapid growth of artificial intelligence (AI) has made low-precision formats such as FP16, FP8, and, most recently, block-scaled FP4 the primary focus of modern GPUs, where Tensor Cores now deliver orders-of-magnitude higher throughput…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-11-19 Angelika Schwarz , Anton Anders , Cole Brower , Harun Bayraktar , John Gunnels , Kate Clark , RuQing G. Xu , Samuel Rodriguez , Sebastien Cayrols , Paweł Tabaszewski , Victor Podlozhnyuk

Edge computing's growing prominence, due to its ability to reduce communication latency and enable real-time processing, is promoting the rise of high-performance, heterogeneous System-on-Chip solutions. While current approaches often…

Artificial Intelligence · Computer Science 2024-09-24 Rakshith Jayanth , Neelesh Gupta , Viktor Prasanna

In recent decades, High Performance Computing (HPC) has undergone significant enhancements, particularly in the realm of hardware platforms, aimed at delivering increased processing power while keeping power consumption within reasonable…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-10-03 S. -Kazem Shekofteh , Christian Alles , Nils Kochendörfer , Holger Fröning

We have developed molecular dynamics codes for a short-range interaction potential that adopt both the flat-MPI and MPI/OpenMP hybrid parallelizations on the basis of a full domain decomposition strategy. Benchmark simulations involving up…

Computational Physics · Physics 2013-11-28 Hiroshi Watanabe , Masaru Suzuki , Nobuyasu Ito

The Fast Tracker (FTK) is an ATLAS trigger upgrade built for full event, low-latency, high-rate tracking. The FTK core, made of 9U VME boards, performs the most demanding computational task. The Associative Memory Board Serial Link…

This study systematically tests a computational power reuse scheme proposed by the open source community disabling specific instruction sets (Fused Multiply Add instructions) through CUDA source code modifications on the NVIDIA CMP 170HX…

Hardware Architecture · Computer Science 2025-05-09 Xing Kangwei

We use OpenMP to target hardware accelerators (GPUs) on Summit, a newly deployed supercomputer at the Oak Ridge Leadership Computing Facility (OLCF), demonstrating simplified access to GPU devices for users of our astrophysics code GenASiS…

Computational Physics · Physics 2019-09-09 Reuben D. Budiardja , Christian Y. Cardall

Unlike traditional PCIe-based FPGA accelerators, heterogeneous SoC-FPGA devices provide tighter integrations between software running on CPUs and hardware accelerators. Modern heterogeneous SoC-FPGA platforms support multiple I/O cache…

Hardware Architecture · Computer Science 2019-08-06 Seung Won Min , Sitao Huang , Mohamed El-Hadedy , Jinjun Xiong , Deming Chen , Wen-mei Hwu

Data management on GPUs has become increasingly relevant due to a tremendous rise in processing power and available GPU memory. Similar to main-memory systems, there is a need for performant GPU-resident index structures to speed up query…

Databases · Computer Science 2023-09-28 Justus Henneberg , Felix Schuhknecht

FPGA accelerators on the NIC enable the offloading of expensive packet processing tasks from the CPU. However, FPGAs have limited resources that may need to be shared among diverse applications, and programming them is difficult. We present…

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