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Knowledge Graphs (KGs) have been used to organize large datasets into structured, interconnected information, enhancing data analytics across various fields. In the legislative context, one potential natural application of KGs is modeling…

Databases · Computer Science 2024-09-23 Andrea Colombo

Knowledge graphs (KGs) can be enhanced through rule mining; however, the resulting logical rules are often difficult for humans to interpret due to their inherent complexity and the idiosyncratic labeling conventions of individual KGs. This…

Computation and Language · Computer Science 2025-08-18 Nasim Shirvani-Mahdavi , Chengkai Li

Neuroscience research publications encompass a vast wealth of knowledge. Accurately retrieving existing information and discovering new insights from this extensive literature is essential for advancing the field. However, when knowledge is…

Computation and Language · Computer Science 2025-10-28 Pralaypati Ta , Sriram Venkatesaperumal , Keerthi Ram , Mohanasankar Sivaprakasam

Knowledge graph completion (KGC) focuses on identifying missing triples in a knowledge graph (KG) , which is crucial for many downstream applications. Given the rapid development of large language models (LLMs), some LLM-based methods are…

Computation and Language · Computer Science 2025-01-06 Rui Yang , Jiahao Zhu , Jianping Man , Hongze Liu , Li Fang , Yi Zhou

Discovery gene-disease links is important in biology and medicine areas, enabling disease identification and drug repurposing. Machine learning approaches accelerate this process by leveraging biological knowledge represented in ontologies…

Machine Learning · Computer Science 2025-04-14 Catarina Canastra , Cátia Pesquita

Knowledge graph completion (KGC) aims to predict missing facts in knowledge graphs (KGs), which is crucial as modern KGs remain largely incomplete. While training KGC models on multiple aligned KGs can improve performance, previous methods…

Computation and Language · Computer Science 2023-12-19 Wei Tang , Zhiqian Wu , Yixin Cao , Yong Liao , Pengyuan Zhou

The increasing reliance on Large Language Models (LLMs) for health information seeking can pose severe risks due to the potential for misinformation and the complexity of these topics. This paper introduces KNOWNET a visualization system…

Human-Computer Interaction · Computer Science 2024-09-27 Youfu Yan , Yu Hou , Yongkang Xiao , Rui Zhang , Qianwen Wang

Knowledge graphs (KGs) are a popular way to organise information based on ontologies or schemas and have been used across a variety of scenarios from search to recommendation. Despite advances in KGs, representing knowledge remains a…

Artificial Intelligence · Computer Science 2023-10-10 Christos Theodoropoulos , Natasha Mulligan , Thaddeus Stappenbeck , Joao Bettencourt-Silva

Schema matching is a critical task in data integration, particularly in the medical domain where disparate Electronic Health Record (EHR) systems must be aligned to standard models like OMOP CDM. While Large Language Models (LLMs) have…

Artificial Intelligence · Computer Science 2025-12-02 Mingyu Jeon , Jaeyoung Suh , Suwan Cho

Despite many advances in knowledge engineering (KE), challenges remain in areas such as engineering knowledge graphs (KGs) at scale, keeping up with evolving domain knowledge, multilingualism, and multimodality. Recently, KE has used LLMs…

Human-Computer Interaction · Computer Science 2025-10-23 Elisavet Koutsiana , Johanna Walker , Michelle Nwachukwu , Bohui Zhang , Albert Meroño-Peñuela , Elena Simperl

Large Language Models (LLMs) have demonstrated remarkable success in various tasks such as natural language understanding, text summarization, and machine translation. However, their general-purpose nature often limits their effectiveness…

Computation and Language · Computer Science 2025-09-03 Zirui Song , Bin Yan , Yuhan Liu , Miao Fang , Mingzhe Li , Rui Yan , Xiuying Chen

The advent of large language models (LLMs) has revolutionized the integration of knowledge graphs (KGs) in biomedical and cognitive sciences, overcoming limitations in traditional machine learning methods for capturing intricate semantic…

Artificial Intelligence · Computer Science 2025-10-09 Ali Sarabadani , Kheirolah Rahsepar Fard

Knowledge Graphs (KG) and associated Knowledge Graph Embedding (KGE) models have recently begun to be explored in the context of drug discovery and have the potential to assist in key challenges such as target identification. In the drug…

Biomolecules · Quantitative Biology 2022-06-01 Stephen Bonner , Ian P Barrett , Cheng Ye , Rowan Swiers , Ola Engkvist , Charles Tapley Hoyt , William L Hamilton

Large language model (LLM) based knowledge graph completion (KGC) aims to predict the missing triples in the KGs with LLMs. However, research about LLM-based KGC fails to sufficiently harness LLMs' inference proficiencies, overlooking…

Computation and Language · Computer Science 2024-04-16 Yichi Zhang , Zhuo Chen , Lingbing Guo , Yajing Xu , Wen Zhang , Huajun Chen

Knowledge graphs (KGs), i.e. representation of information as a semantic graph, provide a significant test bed for many tasks including question answering, recommendation, and link prediction. Various amount of scholarly metadata have been…

Artificial Intelligence · Computer Science 2019-04-30 Mojtaba Nayyeri , Sahar Vahdati , Jens Lehmann , Hamed Shariat Yazdi

Currently, the main approach for Large Language Models (LLMs) to tackle the hallucination issue is incorporating Knowledge Graphs(KGs).However, LLMs typically treat KGs as plain text, extracting only semantic information and limiting their…

Computation and Language · Computer Science 2025-09-29 Yifang Zhang , Pengfei Duan , Yiwen Yang , Shengwu Xiong

Enriching existing medical terminology knowledge bases (KBs) is an important and never-ending work for clinical research because new terminology alias may be continually added and standard terminologies may be newly renamed. In this paper,…

Computation and Language · Computer Science 2019-09-04 Jiaying Zhang , Zhixing Zhang , Huanhuan Zhang , Zhiyuan Ma , Yangming Zhou , Ping He

Large language models (LLMs) perform well in medical QA, but their effectiveness in Japanese contexts is limited due to privacy constraints that prevent the use of commercial models like GPT-4 in clinical settings. As a result, recent…

Computation and Language · Computer Science 2025-04-29 Yingjian Chen , Feiyang Li , Xingyu Song , Tianxiao Li , Zixin Xu , Xiujie Chen , Issey Sukeda , Irene Li

This paper shows how to construct knowledge graphs (KGs) from pre-trained language models (e.g., BERT, GPT-2/3), without human supervision. Popular KGs (e.g, Wikidata, NELL) are built in either a supervised or semi-supervised manner,…

Computation and Language · Computer Science 2020-10-26 Chenguang Wang , Xiao Liu , Dawn Song

Knowledge graphs and ontologies represent entities and their relationships in a structured way, having gained significance in the development of modern AI applications. Integrating these semantic resources with machine learning models often…

Machine Learning · Computer Science 2025-09-10 Hamid Ahmad , Heiko Paulheim , Rita T. Sousa