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This paper aims at providing a survey on the problems that can be easily addressed by clonalbased cellular automata in bioinformatics. Researchers try to address the problems in bioinformatics independent of each problem. None of the…

Computational Engineering, Finance, and Science · Computer Science 2014-05-14 Pokkuluri Kiran Sree , Inampudi Ramesh Babu

This article introduces new tools to study self-organisation in a family of simple cellular automata which contain some particle-like objects with good collision properties (coalescence) in their time evolution. We draw an initial…

Dynamical Systems · Mathematics 2018-06-05 Benjamin Hellouin de Menibus , Mathieu Sablik

Medical imaging classifiers can achieve high predictive accuracy, but quantifying their uncertainty remains an unresolved challenge, which prevents their deployment in medical clinics. We present an algorithm that can modify any classifier…

Machine Learning · Computer Science 2024-08-12 Roy Hirsch , Jacob Goldberger

Cellular automata and other discrete dynamical systems have long been studied as models of emergent complexity. Recently, neural cellular automata have been proposed as models to investigate the emerge of a more general artificial…

Cellular Automata and Lattice Gases · Physics 2025-07-28 Sanyam Jain , Stefano Nichele

The 1-identification problem is a fundamental pure-exploration problem in multi-armed bandits. An agent aims to determine whether there exists an arm whose mean reward exceeds a known threshold $\mu_0$, or to output \textsf{None} otherwise.…

Machine Learning · Computer Science 2026-05-15 Zitian Li , Wang Chi Cheung

Partitioned cellular automata are known to be an useful tool to simulate linear and nonlinear problems in physics, specially because they allow for a straightforward way to define conserved quantities and reversible dynamics. Here we show…

Cellular Automata and Lattice Gases · Physics 2020-12-17 Pedro C. S. Costa , Fernando de Melo

This note is a survey of examples and results about cellular automata with the purpose of recalling that there is no 'universal' way of being computationally universal. In particular, we show how some cellular automata can embed efficient…

Computational Complexity · Computer Science 2021-12-03 Guillaume Theyssier

Microbiological systems evolve to fulfill their tasks with maximal efficiency. The immune system is a remarkable example, where self-non self distinction is accomplished by means of molecular interaction between self proteins and antigens,…

Cell Behavior · Quantitative Biology 2013-08-26 Marcio Argollo de Menezes , Edgardo Brigatti , Veit Schwämmle

Parameter identification problems are formulated in a probabilistic language, where the randomness reflects the uncertainty about the knowledge of the true values. This setting allows conceptually easily to incorporate new information, e.g.…

Numerical Analysis · Computer Science 2013-03-19 Bojana V. Rosić , Anna Kučerová , Jan Sýkora , Oliver Pajonk , Alexander Litvinenko , Hermann G. Matthies

This paper considers the problem of parameter identification for a multirobot system. We wish to understand when is it feasible for an adversarial observer to reverse-engineer the parameters of tasks being performed by a team of robots by…

Optimization and Control · Mathematics 2020-09-30 Jaskaran Singh Grover , Changliu Liu , Katia Sycara

We say that a Cellular Automata (CA) is coalescing when its execution on two distinct (random) initial configurations in the same asynchronous mode (the same cells are updated in each configuration at each time step) makes both…

Cellular Automata and Lattice Gases · Physics 2007-05-23 Jean-Baptiste Rouquier , Michel Morvan

Random boolean cellular automata are investigated, where each gate has two randomly chosen inputs and is randomly assigned a boolean function of its inputs. The effect of non-uniform distributions on the choice of the boolean functions is…

adap-org · Physics 2008-02-03 James F. Lynch

We investigate the density classification task (DCT) -- determining the majority bit in a one-dimensional binary lattice -- within a quantum cellular automaton (CA) framework. While there is no one-dimensional two-state, radius $r \geq 1$,…

Quantum Physics · Physics 2025-10-09 Pedro C. S. Costa , Yuval R. Sanders , Pedro Paulo Balbi , Gavin K. Brennen

The paper considers the problem of finding the number of dominant voters in two-level voting procedures. At the first stage, voting is conducted among local groups of voters, and at the second stage, the results are aggregated to form a…

Discrete Mathematics · Computer Science 2025-06-11 N. I. Shushko , D. V. Lemtyuzhnikova

Cellular automata are a set of computational models in discrete space that have a discrete time evolution defined by neighbourhood rules. They are used to simulate many complex systems in physics and science in general. In this work,…

Cellular Automata and Lattice Gases · Physics 2023-05-12 Luca Bertolani , Andrea Idini

Cellular automata are capable of developing complex behaviors based on simple local interactions between their elements. Some of these characteristics have been used to propose and improve meta-heuristics for global optimization; however,…

A commonly used model for fault-tolerant computation is that of cellular automata. The essential difficulty of fault-tolerant computation is present in the special case of simply remembering a bit in the presence of faults, and that is the…

Probability · Mathematics 2012-07-25 Mark McCann , Nicholas Pippenger

The asymptotic behavior of a cellular automaton iterated on a random configuration is well described by its limit probability measure(s). In this paper, we characterize measures and sets of measures that can be reached as limit points after…

Dynamical Systems · Mathematics 2016-04-08 Benjamin Hellouin de Menibus , Mathieu Sablik

We present a new technique for demonstrating the reachability of states in deterministic finite automata representing the concatenation of two languages. Such demonstrations are a necessary step in establishing the state complexity of the…

Formal Languages and Automata Theory · Computer Science 2017-10-19 Sylvie Davies

We propose the characterization of binary cellular automata using a set of behavioral metrics that are applied to the minimal Boolean form of a cellular automaton's transition function. These behavioral metrics are formulated to satisfy…

Formal Languages and Automata Theory · Computer Science 2015-01-19 Juan C. López-González , Antonio Rueda-Toicen