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Different directed acyclic graphs (DAGs) may be Markov equivalent in the sense that they entail the same conditional independence relations among the observed variables. Meek (1995) characterizes Markov equivalence classes for DAGs (with no…

Methodology · Statistics 2012-06-26 Jiji Zhang

Discovering the causal relationship via recovering the directed acyclic graph (DAG) structure from the observed data is a well-known challenging combinatorial problem. When there are latent variables, the problem becomes even more…

Machine Learning · Statistics 2023-11-02 Yunfeng Cai , Xu Li , Minging Sun , Ping Li

Causal discovery aims to infer causal relationships among variables from observational data, typically represented by a directed acyclic graph (DAG). Most existing methods assume independent and identically distributed observations, an…

Methodology · Statistics 2026-03-27 Alex Chen , Qing Zhou

Conditions are presented for different types of identifiability of discrete variable models generated over an undirected graph in which one node represents a binary hidden variable. These models can be seen as extensions of the latent class…

Methodology · Statistics 2013-12-12 Elena Stanghellini , Barbara Vantaggi

We establish conditions under which latent causal graphs are nonparametrically identifiable and can be reconstructed from unknown interventions in the latent space. Our primary focus is the identification of the latent structure in…

Machine Learning · Statistics 2023-11-06 Yibo Jiang , Bryon Aragam

Bayesian networks are a class of popular graphical models that encode causal and conditional independence relations among variables by directed acyclic graphs (DAGs). We propose a novel structure learning method, annealing on regularized…

Machine Learning · Statistics 2020-05-04 Qiaoling Ye , Arash A. Amini , Qing Zhou

In this paper, we study discrete Lyapunov models, which consist of steady-state distributions of first-order vector autoregressive models. The parameter matrix of such a model encodes a directed graph whose vertices correspond to the…

Linear causal models are important tools for modeling causal dependencies and yet in practice, only a subset of the variables can be observed. In this paper, we examine the parameter identifiability of these models by investigating whether…

Machine Learning · Computer Science 2025-02-11 Xinshuai Dong , Ignavier Ng , Biwei Huang , Yuewen Sun , Songyao Jin , Roberto Legaspi , Peter Spirtes , Kun Zhang

We propose an empirical Bayes formulation of the structure learning problem, where the prior specification assumes that all node variables have the same error variance, an assumption known to ensure the identifiability of the underlying…

Computation · Statistics 2023-08-17 Hyunwoong Chang , James Cai , Quan Zhou

A causal model is an abstract representation of a physical system as a directed acyclic graph (DAG), where the statistical dependencies are encoded using a graphical criterion called `d-separation'. Recent work by Wood & Spekkens shows that…

Quantum Physics · Physics 2015-08-10 Jacques Pienaar , Caslav Brukner

We propose a two-level information-theoretic framework for characterizing the informational organization of Agent-Based Model (ABM) dynamics within the broader paradigm of Complex Adaptive Systems (CAS). At the macro level, a pooled…

Multiagent Systems · Computer Science 2026-01-13 Roberto Garrone

Linear compartmental models are a widely used tool for analyzing systems arising in biology, medicine, and more. In such settings, it is essential to know whether model parameters can be recovered from experimental data. This is the…

Combinatorics · Mathematics 2025-11-18 Katherine Clemens , Jonathan Martinez , Anne Shiu , Michaela Thompson , Benjamin Warren

Different directed acyclic graphs (DAGs) may be Markov equivalent in the sense that they entail the same conditional independence relations among the observed variables. Chickering (1995) provided a transformational characterization of…

Artificial Intelligence · Computer Science 2012-07-09 Jiji Zhang , Peter L. Spirtes

Background: Many biological systems are modeled qualitatively with discrete models, such as probabilistic Boolean networks, logical models, Petri nets, and agent-based models, with the goal to gain a better understanding of the system. The…

Context-specific Bayesian networks (i.e. directed acyclic graphs, DAGs) identify context-dependent relationships between variables, but the non-convexity induced by the acyclicity requirement makes it difficult to share information between…

Machine Learning · Statistics 2021-11-02 Ben Lengerich , Caleb Ellington , Bryon Aragam , Eric P. Xing , Manolis Kellis

We study parameter identifiability of directed Gaussian graphical models with one latent variable. In the scenario we consider, the latent variable is a confounder that forms a source node of the graph and is a parent to all other nodes,…

Statistics Theory · Mathematics 2015-05-08 Dennis Leung , Mathias Drton , Hisayuki Hara

Counting and uniform sampling of directed acyclic graphs (DAGs) from a Markov equivalence class are fundamental tasks in graphical causal analysis. In this paper, we show that these tasks can be performed in polynomial time, solving a…

Machine Learning · Computer Science 2020-12-18 Marcel Wienöbst , Max Bannach , Maciej Liśkiewicz

Directed acyclic graphs (DAGs) can be characterised as directed graphs whose strongly connected components are isolated vertices. Using this restriction on the strong components, we discover that when $m = cn$, where $m$ is the number of…

Combinatorics · Mathematics 2020-04-21 Élie de Panafieu , Sergey Dovgal

The identifiability analysis of linear Ordinary Differential Equation (ODE) systems is a necessary prerequisite for making reliable causal inferences about these systems. While identifiability has been well studied in scenarios where the…

Machine Learning · Statistics 2024-10-31 Yuanyuan Wang , Biwei Huang , Wei Huang , Xi Geng , Mingming Gong

We consider the problem of learning a set of direct causes of a target variable from an observational joint distribution. Learning directed acyclic graphs (DAGs) that represent the causal structure is a fundamental problem in science.…

Methodology · Statistics 2025-06-24 Juraj Bodik , Valérie Chavez-Demoulin
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