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The problem of solving linear systems is one of the most fundamental problems in computer science, where given a satisfiable linear system $(A,b)$, for $A \in \mathbb{R}^{n \times n}$ and $b \in \mathbb{R}^n$, we wish to find a vector $x…

Data Structures and Algorithms · Computer Science 2021-06-25 Mitali Bafna , Nikhil Vyas

The {\it matrix-chain multiplication} problem is a classic problem that is widely taught to illustrate dynamic programming. The textbook solution runs in $\theta(n^3)$ time. However, there is a complex $O(n \log n)$-time method \cite{HU82},…

Discrete Mathematics · Computer Science 2021-04-06 Thong Le , Dan Gusfield

Finding the common subsequences of $L$ multiple strings has many applications in the area of bioinformatics, computational linguistics, and information retrieval. A well-known result states that finding a Longest Common Subsequence (LCS)…

Data Structures and Algorithms · Computer Science 2020-09-09 Jin Cao , Dewei Zhong

We consider the Abelian longest common factor problem in two scenarios: when input strings are uncompressed and are of size $n$, and when the input strings are run-length encoded and their compressed representations have size at most $m$.…

Data Structures and Algorithms · Computer Science 2018-04-19 Szymon Grabowski , Tomasz Kociumaka , Jakub Radoszewski

Palindromes are important objects in strings which have been extensively studied from combinatorial, algorithmic, and bioinformatics points of views. It is known that the length of the longest palindromic substrings (LPSs) of a given string…

Data Structures and Algorithms · Computer Science 2021-01-11 Mitsuru Funakoshi , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

Computing shortest paths is one of the central problems in the theory of distributed computing. For the last few years, substantial progress has been made on the approximate single source shortest paths problem, culminating in an algorithm…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-04-13 Mohsen Ghaffari , Jason Li

In this work, we construct the first locally-correctable codes (LCCs), and locally-testable codes (LTCs) with constant rate, constant relative distance, and sub-polynomial query complexity. Specifically, we show that there exist binary LCCs…

Computational Complexity · Computer Science 2015-04-23 Swastik Kopparty , Or Meir , Noga Ron-Zewi , Shubhangi Saraf

We consider the problem of approximate counting of triangles and longer fixed length cycles in directed graphs. For triangles, T\v{e}tek [ICALP'22] gave an algorithm that returns a $(1 \pm \eps)$-approximation in…

Data Structures and Algorithms · Computer Science 2024-10-01 Keren Censor-Hillel , Tomer Even , Virginia Vassilevska Williams

In this work we revisit the elementary scheduling problem $1||\sum p_j U_j$. The goal is to select, among $n$ jobs with processing times and due dates, a subset of jobs with maximum total processing time that can be scheduled in sequence…

Data Structures and Algorithms · Computer Science 2025-07-23 Nick Fischer , Leo Wennmann

In this paper, we consider a generalized longest common subsequence problem, the string-excluding constrained LCS problem. For the two input sequences $X$ and $Y$ of lengths $n$ and $m$, and a constraint string $P$ of length $r$, the…

Data Structures and Algorithms · Computer Science 2013-01-31 Lei Wang , Xiaodong Wang , Yingjie Wu , Daxin Zhu

The Longest Common Subsequence Problem (LCS) deals with finding the longest subsequence among a given set of strings. The LCS problem is an NP-hard problem which makes it a target for lots of effort to find a better solution with heuristics…

Data Structures and Algorithms · Computer Science 2022-06-24 Alireza Abdi , Mohsen Hooshmand

We give an $\tilde O(n^2)$ time algorithm for computing the exact Dynamic Time Warping distance between two strings whose run-length encoding is of size at most $n$. This matches (up to log factors) the known (conditional) lower bound, and…

Data Structures and Algorithms · Computer Science 2023-02-14 Itai Boneh , Shay Golan , Shay Mozes , Oren Weimann

In this work, we study the trade-off between the running time of approximation algorithms and their approximation guarantees. By leveraging a structure of the `hard' instances of the Arora-Rao-Vazirani lemma [JACM'09], we show that the…

Data Structures and Algorithms · Computer Science 2018-07-27 Pasin Manurangsi , Luca Trevisan

The problem of finding \emph{distance} between \emph{pattern} of length $m$ and \emph{text} of length $n$ is a typical way of generalizing pattern matching to incorporate dissimilarity score. For both Hamming and $L_1$ distances only a…

Data Structures and Algorithms · Computer Science 2018-05-04 Przemysław Uznański

The Fr\'echet distance is a commonly used distance measure for curves. Computing the Fr\'echet distance between two polygonal curves of $n$ vertices takes roughly quadratic time, and conditional lower bounds suggest that approximating to…

Computational Geometry · Computer Science 2025-05-09 Thijs van der Horst , Marc van Kreveld , Tim Ophelders , Bettina Speckmann

The problem of detecting and removing redundant constraints is fundamental in optimization. We focus on the case of linear programs (LPs), given by $d$ variables with $n$ inequality constraints. A constraint is called \emph{redundant}, if…

Data Structures and Algorithms · Computer Science 2016-10-11 Komei Fukuda , May Szedlak

This note provides very simple, efficient algorithms for computing the number of distinct longest common subsequences of two input strings and for computing the number of LCS embeddings.

Data Structures and Algorithms · Computer Science 2007-05-23 Ronald I. Greenberg

The equidistant subsequence pattern matching problem is considered. Given a pattern string $P$ and a text string $T$, we say that $P$ is an \emph{equidistant subsequence} of $T$ if $P$ is a subsequence of the text such that consecutive…

Data Structures and Algorithms · Computer Science 2020-02-18 Mitsuru Funakoshi , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda , Ayumi Shinohara

We study the problem of estimating the size of maximum matching and minimum vertex cover in sublinear time. Denoting the number of vertices by $n$ and the average degree in the graph by $\bar{d}$, we obtain the following results for both…

Data Structures and Algorithms · Computer Science 2022-03-03 Soheil Behnezhad

Given a set $Z$ of $n$ positive integers and a target value $t$, the Subset Sum problem asks whether any subset of $Z$ sums to $t$. A textbook pseudopolynomial time algorithm by Bellman from 1957 solves Subset Sum in time $O(nt)$. This has…

Data Structures and Algorithms · Computer Science 2017-01-10 Karl Bringmann