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Related papers: smFRET reveals DHX36 repetitive binding,not unfold…

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Chen et al. solved the crystal structure of bovine DHX36 bound to a DNA with a G-quadruplex (G4) and a single-stranded DNA segment. They believed that the mechanism they proposed may represent a general model for describing how a…

Biomolecules · Quantitative Biology 2019-09-24 Hai-Lei Guo , Wei-Fei Chen , Stephane Rety , Na-Nv Liu , Ze-Yu Song , Yan-Xue Dai , Xi-Miao Hou , Shuo-Xing Dou , Xu-Guang Xi

A mathematico-physically valid formulation is required to infer properties of disordered protein conformations from single-molecule F\"orster resonance energy transfer (smFRET). Conformational dimensions inferred by conventional approaches…

Biomolecules · Quantitative Biology 2017-09-13 Jianhui Song , Gregory-Neal Gomes , Tongfei Shi , Claudiu C. Gradinaru , Hue Sun Chan

We consider homologically essential simple closed curves on Seifert surfaces of genus one knots in $S^3$, and in particular those that are unknotted or slice in $S^3$. We completely characterize all such curves for most twist knots: they…

Geometric Topology · Mathematics 2024-07-24 Subhankar Dey , Veronica King , Colby T. Shaw , Bülent Tosun , Bruce Trace

In this paper we study the existence of heteroclinic cycles in generic unfoldings of nilpotent singularities. Namely we prove that any nilpotent singularity of codimension four in $\mathbb{R}^4$ unfolds generically a bifurcation…

Dynamical Systems · Mathematics 2015-07-23 Pablo G. Barrientos , Santiago Ibáñez , J. Ángel Rodríguez

We study the problem of constructing a graph Fourier transform (GFT) for directed graphs (digraphs), which decomposes graph signals into different modes of variation with respect to the underlying network. Accordingly, to capture low,…

Spectral Theory · Mathematics 2017-06-01 Rasoul Shafipour , Ali Khodabakhsh , Gonzalo Mateos , Evdokia Nikolova

The formation of ordered phases of dimethyl-disulfide on the Au(111) surface has been investigated by means of Low-Energy Electron Diffraction (LEED), X-ray Photoemission Spectroscopy (XPS), and state-of-the-art Density Functional Theory…

Condensed Matter · Physics 2007-05-23 V. De Renzi , D. Marchetto , R. Biagi , U. del Pennino , R. Di Felice , A. Selloni

X-ray magnetic circular and linear dichroism (XMCD and XMLD) have been used to investigate the Fe magnetic response during the spin reorientation transition (SRT) in TmFeO3. These experiments are complemented with resonant magnetic…

Resonant soft x-ray Bragg diffraction at the Dy M4,5 edges has been exploited to study Dy multipole motifs in DyB2C2. Our results are explained introducing the intra-atomic quadrupolar interaction between the core 3d and valence 4f shell.…

Strongly Correlated Electrons · Physics 2009-11-11 A. M. Mulders , U. Staub , V. Scagnoli , S. W. Lovesey , E. Balcar , T. Nakamura , A. Kikkawa , G. van der Laan , J. M. Tonnerre

We investigate the existence of holomorphic Hartree-Fock solutions using a revised SCF algorithm. We use this algorithm to study the Hartree-Fock solutions for H$_{2}$ and H$_{4}^{2+}$ and report the emergence of holomorphic solutions at…

Chemical Physics · Physics 2015-11-20 Hugh G. A. Burton , Alex J. W. Thom

We apply spatial dynamical-systems techniques to prove that certain spatiotemporal patterns in reversible reaction-diffusion equations undergo snaking bifurcations. That is, in a narrow region of parameter space, countably many branches of…

Dynamical Systems · Mathematics 2025-07-23 Timothy Roberts , Bjorn Sandstede

The stable and unstable manifolds of an invariant set of a piecewise-smooth map are themselves piecewise-smooth. Consequently, as parameters of a piecewise-smooth map are varied, an invariant set can develop a homoclinic connection when its…

Dynamical Systems · Mathematics 2016-08-03 David J. W. Simpson

The pressure dependence of the interlayer magnetoresistance of the quasi-two dimensional organic metal beta''-(BEDT-TTF)4(NH4)[Fe(C2O4)3].DMF has been investigated up to 1 GPa in pulsed magnetic fields up to 55 T. The Shubnikov-de Haas…

In this paper we study the existence of doubly-connected rotating patches for Euler equations when the classical non-degeneracy conditions are not satisfied. We prove the bifurcation of the V-states with two-fold symmetry, however for…

Analysis of PDEs · Mathematics 2015-10-16 Taoufik Hmidi , Joan Mateu

We derive a holographic relation for the dS static patch with the dual field theory defined on the observer horizon. The starting point is the duality of higher-spin theory on AdS_4 and the O(N) vector model. We build on a similar analytic…

High Energy Physics - Theory · Physics 2013-08-15 Andreas Karch , Christoph F. Uhlemann

We study main bifurcations of multidimensional diffeomorphisms having a non-transversal homoclinic orbit to a saddle-node fixed point. On a parameter plane we build a bifurcation diagram for single-round periodic orbits lying entirely in a…

Dynamical Systems · Mathematics 2014-12-03 S. V. Gonchenko , O. V. Gordeeva , V. I. Lukjanov , I. I. Ovsyannikov

The complexity of the list homomorphism problem for signed graphs appears difficult to classify. Existing results focus on special classes of signed graphs, such as trees and reflexive signed graphs. Irreflexive signed graphs are in a…

Discrete Mathematics · Computer Science 2024-04-22 Jan Bok , Richard Brewster , Tomás Feder , Pavol Hell , Nikola Jedličková

We study the resonance behaviour of the forbidden 600 and 222 x-ray Bragg peaks in Ge using LDA band structure methods. These Bragg peaks remain forbidden in the resonant dipole scattering approximation even taking into account the non…

Strongly Correlated Electrons · Physics 2009-11-07 I. S. Elfimov , N. A. Skorikov , V. I. Anisimov , G. A. Sawatzky

Possible ways of identification are discussed of an electronic order of higher multipoles such as octupoles and hexadecapoles. A particularly powerful method is resonant X-ray scattering (RXS) using quadrupolar resonance processes called…

Strongly Correlated Electrons · Physics 2009-11-11 Y. Kuramoto , H. Kusunose , A. Kiss

Low-energy instabilities in the hole doped cuprates include, besides short range antiferromagnetic fluctuations and superconductivity, also ubiquitous translational and rotational symmetry breakings. The overwhelming majority of…

Superconductivity · Physics 2015-10-06 Itai Panas

Unfolding homoclinic tangencies is the main source of bifurcations in 2-dimensional (real or complex) dynamics. When studying this phenomenon, it is common to assume that tangencies are quadratic and unfold with positive speed. Adapting to…

Dynamical Systems · Mathematics 2023-06-21 Romain Dujardin
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