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Progress in neuroscience constantly relies on the development of new techniques to investigate the complex dynamics of neuronal networks. An ongoing challenge is to achieve minimally-invasive and high-resolution observations of neuronal…

Coherent microscopy techniques provide an unparalleled multi-scale view of materials across scientific and technological fields, from structural materials to quantum devices, from integrated circuits to biological cells. Driven by the…

The advent of cost effective cloud computing over the past decade and ever-growing accumulation of high-fidelity clinical data in a modern hospital setting is leading to new opportunities for translational medicine. Machine learning is…

Databases · Computer Science 2021-06-09 Sanjay Malunjkar , Susan Weber , Somalee Datta

Objectives: Grid-based technologies are emerging as potential solutions for managing and collaborating distributed resources in the biomedical domain. Few examples exist, however, of successful implementations of Grid-enabled medical…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-07-06 F. Estrella , T. Hauer , R. McClatchey , M. Odeh , D Rogulin , T. Solomonides

We suggest a new web-based approach for browsing and visualizing data produced by a network of telescopes, such as those of the ongoing TAOS and the forthcoming TAOS II projects. We propose a modern client-side technology and we present two…

Instrumentation and Methods for Astrophysics · Physics 2014-08-28 D. Ricci , P. -G. Sprimont , C. Ayala , F. G. Ramón-Fox , R. Michel , S. Navarro , S. -Y. Wang , Z. -W. Zhang , M. J. Lehner , L. Nicastro , M. Reyes-Ruiz

Advances in high-throughput microscopy have enabled the rapid acquisition of large numbers of high-content microscopy images. Whether by deep learning or classical algorithms, image analysis pipelines then produce single-cell features. To…

We describe a new, low-cost system designed to provide multi-sensor remote condition monitoring of modern scientific laboratories, as well as to allow users to perform actions from remote locations in case of detection of specified events.…

Networking and Internet Architecture · Computer Science 2024-06-19 Lorenzo Francesco Livi , Jacopo Catani

In microscopy, the time burden and cost of acquiring and annotating large datasets that many deep learning models take as a prerequisite, often appears to make these methods impractical. Can this requirement for annotated data be relaxed?…

Image and Video Processing · Electrical Eng. & Systems 2020-11-10 Adrian Shajkofci , Michael Liebling

Expensive scientific camera hardware is amongst the main cost factors in modern, high-performance microscopes. Recent technological advantages have, however, yielded consumer-grade camera devices that can provide surprisingly good…

Image and Video Processing · Electrical Eng. & Systems 2019-03-06 Benedict Diederich , Patrick Then , Alexander Jügler , Ronny Förster , Rainer Heintzmann

The primary focus of this research is the discreet and subtle everyday contact interactions between mobile phones and their surrounding surfaces. Such interactions are anticipated to facilitate mobile context awareness, encompassing aspects…

Human-Computer Interaction · Computer Science 2024-07-23 Yongquan Hu , Hui-Shyong Yeo , Mingyue Yuan , Haoran Fan , Don Samitha Elvitigala , Wen Hu , Aaron Quigley

Digital holography has applications in bio-imaging because it can simultaneously obtain the amplitude and phase information of a microscopic sample in a single shot, thus facilitating non-contact, noninvasive observation of the 3D shape of…

Graphics · Computer Science 2024-06-14 Yuki Nagahama

Recent developments in the commercial open source community have catalysed the use of Linux containers for scalable deployment of web-based applications to the cloud. Scientific software can be containerized with dependencies, configuration…

Software Engineering · Computer Science 2015-09-30 Robert Nagler , David Bruhwiler , Paul Moeller , Stephen Webb

Oblique plane microscopy, OPM, is a form of lightsheet microscopy that permits volumetric imaging of biological samples at high temporal and spatial resolution. However, the imaging geometry of OPM, and related variants of light sheet…

Image and Video Processing · Electrical Eng. & Systems 2022-11-03 Jacob R. Lamb , Edward N. Ward , Clemens F. Kaminski

Image simulation remains under-exploited for the most widely used biological phase microscopy methods, because of difficulties in simulating partially coherent illumination. We describe an open-source toolbox, microlith…

Optics · Physics 2014-05-14 Shalin B. Mehta , Rudolf Oldenbourg

This work discusses preliminary work aimed at simulating and visualizing the growth process of a tiny structure inside the cell---the microtubule. Difficulty of recording the process lies in the fact that the tissue preparation method for…

Computer Vision and Pattern Recognition · Computer Science 2011-05-31 Feiyang Yu , Ard Oerlemans , Erwin M. Bakker

Clinicians benefit from online treatment planning systems, through off-site accessibility, data sharing and professional interaction. As well as enhancing clinical value, incorporation of simulation tools affords innovative avenues for…

Interferometric scattering microscopy is a powerful technique that enables various applications, such as mass photometry and particle tracking. Here we present a numerical toolbox to simulate images obtained in interferometric scattering,…

Underwater marine inspections for ship hull or marine debris, etc. are one of the vital measures carried out to ensure the safety of marine structures and underwater species. This work details the design, development and qualification of a…

Robotics · Computer Science 2020-07-10 Parag Tarwadi , Yuta Shiraki , Ori Ganoni , Shanghai Wei , Ho Seok Ahn , Bruce MacDonald

Surgical robotic systems equipped with microscale, high-dexterity manipulators have shown promising results in minimally invasive surgery (MIS). One barrier to the widespread adoption of such systems is the prohibitive cost of research and…

Robotics · Computer Science 2024-05-28 Lachlan Scott , Tangyou Liu , Liao Wu

Machine learning and artificial intelligence have shown remarkable performance in accelerated magnetic resonance imaging (MRI). Cloud computing technologies have great advantages in building an easily accessible platform to deploy advanced…

Image and Video Processing · Electrical Eng. & Systems 2021-06-14 Yirong Zhou , Chen Qian , Yi Guo , Zi Wang , Jian Wang , Biao Qu , Di Guo , Yongfu You , Xiaobo Qu
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