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We introduce a new method to accurately and efficiently estimate the effective dynamics of collective variables in molecular simulations. Such reduced dynamics play an essential role in the study of a broad class of processes, ranging from…

Statistical Mechanics · Physics 2022-03-28 Hadrien Vroylandt , Ludovic Goudenège , Pierre Monmarché , Fabio Pietrucci , Benjamin Rotenberg

Recurrent neural networks (RNNs) provide a powerful approach in neuroscience to infer latent dynamics in neural populations and to generate hypotheses about the neural computations underlying behavior. However, past work has focused on…

Machine Learning · Computer Science 2025-10-30 Elia Torre , Michele Viscione , Lucas Pompe , Benjamin F Grewe , Valerio Mante

A new language model for speech recognition inspired by linguistic analysis is presented. The model develops hidden hierarchical structure incrementally and uses it to extract meaningful information from the word history - thus enabling the…

Computation and Language · Computer Science 2007-05-23 Ciprian Chelba , Frederick Jelinek

We introduce a Bayesian framework for inference with a supervised version of the Gaussian process latent variable model. The framework overcomes the high correlations between latent variables and hyperparameters by using an unbiased pseudo…

Machine Learning · Statistics 2018-03-29 Charles Gadd , Sara Wade , Akeel Shah , Dimitris Grammatopoulos

Recently several deep learning based models have been proposed for end-to-end learning of dialogs. While these models can be trained from data without the need for any additional annotations, it is hard to interpret them. On the other hand,…

Artificial Intelligence · Computer Science 2018-11-05 Dhiraj Madan , Dinesh Raghu , Gaurav Pandey , Sachindra Joshi

Learning accurate predictive models of real-world dynamic phenomena (e.g., climate, biological) remains a challenging task. One key issue is that the data generated by both natural and artificial processes often comprise time series that…

Machine Learning · Computer Science 2023-06-21 Abdul Fatir Ansari , Alvin Heng , Andre Lim , Harold Soh

In many scientific disciplines structures in high-dimensional data have to be found, e.g., in stellar spectra, in genome data, or in face recognition tasks. In this work we present a novel approach to non-linear dimensionality reduction. It…

Machine Learning · Statistics 2011-09-27 Oliver Kramer

Nature, as far as we know, evolves continuously through space and time. Yet the ubiquitous hidden Markov model (HMM)--originally developed for discrete time and space analysis in natural language processing--remains a central tool in…

Biomolecules · Quantitative Biology 2025-06-09 Max Schweiger , Ayush Saurabh , Steve Pressé

Recently, there has been interest in multiplicative recurrent neural networks for language modeling. Indeed, simple Recurrent Neural Networks (RNNs) encounter difficulties recovering from past mistakes when generating sequences due to high…

Machine Learning · Computer Science 2019-07-02 Diego Maupomé , Marie-Jean Meurs

Learning and understanding the typical patterns in the daily activities and routines of people from low-level sensory data is an important problem in many application domains such as building smart environments, or providing intelligent…

Machine Learning · Computer Science 2014-08-14 Truyen Tran , Hung Bui , Svetha Venkatesh

We perform approximate inference in state-space models with nonlinear state transitions. Without parameterizing a generative model, we apply Bayesian update formulas using a local linearity approximation parameterized by neural networks.…

Machine Learning · Computer Science 2022-01-26 David Ruhe , Patrick Forré

Sparsity is a desirable attribute. It can lead to more efficient and more effective representations compared to the dense model. Meanwhile, learning sparse latent representations has been a challenging problem in the field of computer…

Computer Vision and Pattern Recognition · Computer Science 2022-09-22 Hanao Li , Tian Han

In this paper we derive the consistency of the penalized likelihood method for the number state of the hidden Markov chain in autoregressive models with Markov regimen. Using a SAEM type algorithm to estimate the models parameters. We test…

Statistics Theory · Mathematics 2016-08-16 Ricardo Ríos , Luis Rodríguez

Deep Markov models (DMM) are generative models that are scalable and expressive generalization of Markov models for representation, learning, and inference problems. However, the fundamental stochastic stability guarantees of such models…

Machine Learning · Computer Science 2021-11-09 Ján Drgoňa , Sayak Mukherjee , Jiaxin Zhang , Frank Liu , Mahantesh Halappanavar

Prompt tuning methods for Graph Neural Networks (GNNs) have become popular to address the semantic gap between pre-training and fine-tuning steps. However, existing GNN prompting methods rely on labeled data and involve lightweight…

Machine Learning · Computer Science 2025-05-23 Peyman Baghershahi , Sourav Medya

While discrete latent variable models have had great success in self-supervised learning, most models assume that frames are independent. Due to the segmental nature of phonemes in speech perception, modeling dependencies among latent…

Computation and Language · Computer Science 2022-11-01 Sung-Lin Yeh , Hao Tang

Regression models with both high-dimensional responses and covariates have attracted growing attention. Standard multivariate regression models become inadequate when the response variables depend not only on observed covariates but also on…

Methodology · Statistics 2026-05-01 Jing Ouyang , Chengyu Cui , Yunxiao Chen , Kean Ming Tan , Gongjun Xu

This paper addresses the problem of unsupervised clustering which remains one of the most fundamental challenges in machine learning and artificial intelligence. We propose the clustered generator model for clustering which contains both…

Machine Learning · Statistics 2019-11-20 Dandan Zhu , Tian Han , Linqi Zhou , Xiaokang Yang , Ying Nian Wu

We propose an unsupervised technique for implicit parameterization of data manifolds. In our approach, the data is assumed to belong to a lower dimensional manifold in a higher dimensional space, and the data points are viewed as the…

Machine Learning · Computer Science 2022-10-14 Viktor Reshniak

We consider the problem of flexible modeling of higher order hidden Markov models when the number of latent states and the nature of the serial dependence, including the true order, are unknown. We propose Bayesian nonparametric methodology…

Methodology · Statistics 2019-02-06 Abhra Sarkar , David B. Dunson