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We consider approximate circular pattern matching (CPM, in short) under the Hamming and edit distance, in which we are given a length-$n$ text $T$, a length-$m$ pattern $P$, and a threshold $k>0$, and we are to report all starting positions…

Data Structures and Algorithms · Computer Science 2025-06-13 Panagiotis Charalampopoulos , Tomasz Kociumaka , Jakub Radoszewski , Solon P. Pissis , Wojciech Rytter , Tomasz Waleń , Wiktor Zuba

We study the classical approximate string matching problem, that is, given strings $P$ and $Q$ and an error threshold $k$, find all ending positions of substrings of $Q$ whose edit distance to $P$ is at most $k$. Let $P$ and $Q$ have…

Data Structures and Algorithms · Computer Science 2011-03-21 Philip Bille

The equidistant subsequence pattern matching problem is considered. Given a pattern string $P$ and a text string $T$, we say that $P$ is an \emph{equidistant subsequence} of $T$ if $P$ is a subsequence of the text such that consecutive…

Data Structures and Algorithms · Computer Science 2020-02-18 Mitsuru Funakoshi , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda , Ayumi Shinohara

In this work, we address the problem of approximate pattern matching with wildcards. Given a pattern $P$ of length $m$ containing $D$ wildcards, a text $T$ of length $n$, and an integer $k$, our objective is to identify all fragments of $T$…

Data Structures and Algorithms · Computer Science 2024-05-22 Gabriel Bathie , Panagiotis Charalampopoulos , Tatiana Starikovskaya

We resolve the space complexity of linear sketches for approximating the maximum matching problem in dynamic graph streams where the stream may include both edge insertion and deletion. Specifically, we show that for any $\epsilon > 0$,…

Data Structures and Algorithms · Computer Science 2015-05-07 Sepehr Assadi , Sanjeev Khanna , Yang Li , Grigory Yaroslavtsev

Approximating the length of the longest increasing sequence (LIS) of an array is a well-studied problem. We study this problem in the data stream model, where the algorithm is allowed to make a single left-to-right pass through the array…

Data Structures and Algorithms · Computer Science 2013-04-16 Michael Saks , C. Seshadhri

We show that both clustering and subspace embeddings can be performed in the streaming model with the same asymptotic efficiency as in the central/offline setting. For $(k, z)$-clustering in the streaming model, we achieve a number of words…

Data Structures and Algorithms · Computer Science 2025-04-24 Vincent Cohen-Addad , Liudeng Wang , David P. Woodruff , Samson Zhou

First, for the for the submodular $k$-secretary problem with shortlists [1], we provide a near optimal $1-1/e-\epsilon$ approximation using shortlist of size $O(k poly(1/\epsilon))$. In particular, we improve the size of shortlist used in…

Data Structures and Algorithms · Computer Science 2021-02-22 Mohammad Shadravan

We present streaming algorithms for the graph $k$-matching problem in both the insert-only and dynamic models. Our algorithms, with space complexity matching the best upper bounds, have optimal or near-optimal update time, significantly…

Data Structures and Algorithms · Computer Science 2023-10-18 Jianer Chen , Qin Huang , Iyad Kanj , Qian Li , Ge Xia

In this paper, we study the problem of finding a maximum matching in the semi-streaming model when edges arrive in a random order. In the semi-streaming model, an algorithm receives a stream of edges and it is allowed to have a memory of…

Data Structures and Algorithms · Computer Science 2019-12-24 Alireza Farhadi , MohammadTaghi Hajiaghayi , Tung Mai , Anup Rao , Ryan A. Rossi

The edit distance (ED) and longest common subsequence (LCS) are two fundamental problems which quantify how similar two strings are to one another. In this paper, we consider these problems in the asymmetric streaming model introduced by…

Data Structures and Algorithms · Computer Science 2020-04-17 Alireza Farhadi , MohammadTaghi Hajiaghayi , Aviad Rubinstein , Saeed Seddighin

In the matroid center problem, which generalizes the $k$-center problem, we need to pick a set of centers that is an independent set of a matroid with rank $r$. We study this problem in streaming, where elements of the ground set arrive in…

Data Structures and Algorithms · Computer Science 2020-07-21 Sagar Kale

We study streaming algorithms for two fundamental geometric problems: computing the cost of a Minimum Spanning Tree (MST) of an $n$-point set $X \subset \{1,2,\dots,\Delta\}^d$, and computing the Earth Mover Distance (EMD) between two…

Data Structures and Algorithms · Computer Science 2021-11-08 Xi Chen , Rajesh Jayaram , Amit Levi , Erik Waingarten

We study the classic set cover problem in the streaming model: the sets that comprise the instance are revealed one by one in a stream and the goal is to solve the problem by making one or few passes over the stream while maintaining a…

Data Structures and Algorithms · Computer Science 2017-03-07 Sepehr Assadi

Approximate string matching is the problem of finding all factors of a text t of length n that are at a distance at most k from a pattern x of length m. Approximate circular string matching is the problem of finding all factors of t that…

Data Structures and Algorithms · Computer Science 2016-04-26 Carl Barton , Costas S. Iliopoulos , Solon P. Pissis

Given an LZW/LZ78 compressed text, we want to find an approximate occurrence of a given pattern of length m. The goal is to achieve time complexity depending on the size n of the compressed representation of the text instead of its length.…

Data Structures and Algorithms · Computer Science 2013-09-23 Pawel Gawrychowski , Damian Straszak

Computing the edit distance of two strings is one of the most basic problems in computer science and combinatorial optimization. Tree edit distance is a natural generalization of edit distance in which the task is to compute a measure of…

Data Structures and Algorithms · Computer Science 2022-09-16 Debarati Das , Jacob Gilbert , MohammadTaghi Hajiaghayi , Tomasz Kociumaka , Barna Saha , Hamed Saleh

We consider the classic Set Cover problem in the data stream model. For $n$ elements and $m$ sets ($m\geq n$) we give a $O(1/\delta)$-pass algorithm with a strongly sub-linear $\tilde{O}(mn^{\delta})$ space and logarithmic approximation…

Data Structures and Algorithms · Computer Science 2016-05-03 Sariel Har-Peled , Piotr Indyk , Sepideh Mahabadi , Ali Vakilian

We show that in the document exchange problem, where Alice holds $x \in \{0,1\}^n$ and Bob holds $y \in \{0,1\}^n$, Alice can send Bob a message of size $O(K(\log^2 K+\log n))$ bits such that Bob can recover $x$ using the message and his…

Data Structures and Algorithms · Computer Science 2016-07-15 Djamal Belazzougui , Qin Zhang

We study the streaming complexity of $k$-counter approximate counting. In the $k$-counter approximate counting problem, we are given an input string in $[k]^n$, and we are required to approximate the number of each $j$'s ($j\in[k]$) in the…

Data Structures and Algorithms · Computer Science 2024-06-19 Yichuan Wang