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The quasilinear premise is a hypothesis for the modeling of plasma turbulence in which the turbulent fluctuations are represented by a superposition of randomly-phased linear wave modes, and energy is transferred among these wave modes via…

Solar and Stellar Astrophysics · Physics 2014-04-11 Gregory G. Howes , Kristopher G. Klein , Jason M. TenBarge

Generation of mechanical oscillation is ubiquitous to wide variety of intracellular processes. We show that catchbonding behaviour of motor proteins provides a generic mechanism of generating spontaneous oscillations in motor-cytoskeletal…

Subcellular Processes · Quantitative Biology 2021-11-11 Sougata Guha , MIthun K. Mitra , Ignacio Pagonabarraga , Sudipto Muhuri

Cells move differently on substrates with different elasticities. In particular, the persistence time of their motion is higher on stiffer substrates. We show that this behavior will result in a net transport of cells directed up a…

Biological Physics · Physics 2017-03-09 Elizaveta A. Novikova , Matthew Raab , Dennis E. Discher , Cornelis Storm

Solitons are self-sustained wavepackets that occur in many physical systems. Their recent demonstration in optical microresonators has provided a new platform for study of nonlinear optical physics with practical implications for…

Optics · Physics 2018-10-24 Xu Yi , Qi-Fan Yang , Ki Youl Yang , Kerry Vahala

We perform a theoretical study of the dynamics of the electric field excitations in a microtubule by taking into consideration the realistic cylindrical geometry, dipole-dipole interactions of the tubulin-based protein heterodimers, the…

Biological Physics · Physics 2016-06-29 Alexander I Nesterov , Mónica F Ramírez , Gennady P Berman , Nick E Mavromatos

We describe how to control the motion -- both speed and propagation direction -- of a nonlinear traveling wave in real time via soliton management with time-varying dispersion/diffusion and loss/gain terms. When carried out subject to…

Pattern Formation and Solitons · Physics 2022-07-11 Robert A. Van Gorder

A new model is proposed to explain coiling of myelins composed of fluid bilayers. This model allows the constituent bilayer cylinders of a myelin to be non-coaxial and the bilayer lateral tension to vary from bilayer to bilayer. The…

Soft Condensed Matter · Physics 2009-11-11 Jung-Ren Huang

Solitons - localized wave packets that travel without spreading - play a central role in understanding transport and properties of nonlinear systems, from optical fibers to fluid dynamics. In quantum many-body systems, however, such robust…

Quantum Physics · Physics 2025-07-18 Aron Kerschbaumer , Jean-Yves Desaules , Marko Ljubotina , Maksym Serbyn

Spiral waves are self-repeating waves that can form in excitable media, propagating outward from their center in a spiral pattern. Spiral waves have been observed in different natural phenomena and have been linked to medical conditions…

Cellular Automata and Lattice Gases · Physics 2020-08-11 Vincent Vangelista , Karl Amjad-Ali , Minhyeok Kwon , Paulo H. Acioli

Mechanical signaling plays a key role in biological processes like embryo development and cancer growth. One prominent way to probe mechanical properties of tissues is to study their response to externally applied forces. Using a…

Soft Condensed Matter · Physics 2017-04-18 D. A. Matoz-Fernandez , Elisabeth Agoritsas , Jean-Louis Barrat , Eric Bertin , Kirsten Martens

How the information microscopically processed by individual neurons is integrated and used in organizing the behavior of an animal is a central question in neuroscience. The coherence of neuronal dynamics over different scales has been…

Disordered Systems and Neural Networks · Physics 2020-03-11 Takashi Hayakawa , Tomoki Fukai

Active motions of a biological membrane can be induced by non-thermal fluctuations that occur in the outer environment of the membrane. We discuss the dynamics of a membrane interacting hydrodynamically with an active wall that exerts…

Soft Condensed Matter · Physics 2016-05-18 Kento Yasuda , Shigeyuki Komura , Ryuichi Okamoto

A model of nonlinear elastic medium with internal structure is considered. The medium is assumed to contain cavities, microcracks or blotches of substances that differ sharply in physical properties from the base material. To describe the…

Pattern Formation and Solitons · Physics 2019-09-10 Vsevolod A. Vladimirov , Sergii Skurativskyi

We discuss the electronic transport through molecules in the Kondo regime. We concentrate here on the influence of molecular vibrations. Two types of vibrations are investigated: (i) the breathing internal molecular modes, where the…

Mesoscale and Nanoscale Physics · Physics 2009-12-21 J. Mravlje , A. Ramsak

The linear conductance of a molecular conductor oscillating between two metallic leads is investigated numerically both for Hubbard interacting and noninteracting electrons. The molecule-leads tunneling barriers depend on the molecule…

Mesoscale and Nanoscale Physics · Physics 2009-11-11 K. A. Al-Hassanieh , C. A. Büsser , G. B. Martins , E. Dagotto

We investigate different mechanical effects which accompany the nerve pulse propagation by using mathematical modeling. The propagation process is composed by three connected phenomena: (i) the action potential (electrical signal) which is…

Biological Physics · Physics 2019-06-05 Kert Tamm , Tanel Peets , Jüri Engelbrecht

A collective coordinate theory is develop for soliton ratchets in the damped discrete sine-Gordon model driven by a biharmonic force. An ansatz with two collective coordinates, namely the center and the width of the soliton, is assumed as…

Pattern Formation and Solitons · Physics 2015-01-21 B. Sánchez-Rey , N. R. Quintero , J. Cuevas-Maraver , M. A. Alejo

Interaction of electric fields with biological cells is indispensable for many physiological processes. Thermal electrical noise in the cellular environment has long been considered as the minimum threshold for detection of electrical…

Soft Condensed Matter · Physics 2026-02-24 Anand Mathew , Yashashree Kulkarni

We propose a simple mathematical model to describe the mechanical relaxation of cells within a curved epithelial tissue layer represented by an arbitrary curve in two-dimensional space. This model generalises previous one-dimensional models…

Cellular Automata and Lattice Gases · Physics 2025-01-09 Pascal R. Buenzli , Shahak Kuba , Ryan J. Murphy , Matthew J. Simpson

How internal forces are transduced into motion through soft, fluid membranes remains a fundamental question in the study of active systems. To investigate this coupling, we develop a minimal system consisting of a single ferromagnetic…

Soft Condensed Matter · Physics 2025-07-11 Paula Magrinya , Arin Escobar Ortiz , Juan L. Aragones , Laura R. Arriaga
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