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Annotation is a major hurdle in the semantic segmentation of microscopy images and volumes due to its prerequisite expertise and effort. This work enables the training of semantic segmentation networks on images with only a single point for…

Computer Vision and Pattern Recognition · Computer Science 2021-03-22 Shijie Li , Neel Dey , Katharina Bermond , Leon von der Emde , Christine A. Curcio , Thomas Ach , Guido Gerig

Annotation of medical images has been a major bottleneck for the development of accurate and robust machine learning models. Annotation is costly and time-consuming and typically requires expert knowledge, especially in the medical domain.…

Computer Vision and Pattern Recognition · Computer Science 2020-01-08 Holger Roth , Ling Zhang , Dong Yang , Fausto Milletari , Ziyue Xu , Xiaosong Wang , Daguang Xu

We present WSSAMNet, a weakly supervised method for medical image registration. Ours is a two step method, with the first step being the computation of segmentation masks of the fixed and moving volumes. These masks are then used to attend…

Image and Video Processing · Electrical Eng. & Systems 2022-03-15 Sahar Almahfouz Nasser , Nikhil Cherian Kurian , Saqib Shamsi , Mohit Meena , Amit Sethi

Weakly supervised semantic segmentation receives much research attention since it alleviates the need to obtain a large amount of dense pixel-wise ground-truth annotations for the training images. Compared with other forms of weak…

Computer Vision and Pattern Recognition · Computer Science 2018-03-08 Tianyi Zhang , Guosheng Lin , Jianfei Cai , Tong Shen , Chunhua Shen , Alex C. Kot

Segmentation in 3D scans is playing an increasingly important role in current clinical practice supporting diagnosis, tissue quantification, or treatment planning. The current 3D approaches based on convolutional neural networks usually…

Computer Vision and Pattern Recognition · Computer Science 2019-03-12 Alexey Novikov , David Major , Maria Wimmer , Dimitrios Lenis , Katja Bühler

This paper presents a novel unsupervised segmentation method for 3D medical images. Convolutional neural networks (CNNs) have brought significant advances in image segmentation. However, most of the recent methods rely on supervised…

Computer Vision and Pattern Recognition · Computer Science 2018-04-13 Takayasu Moriya , Holger R. Roth , Shota Nakamura , Hirohisa Oda , Kai Nagara , Masahiro Oda , Kensaku Mori

In this paper, we adopt 3D Convolutional Neural Networks to segment volumetric medical images. Although deep neural networks have been proven to be very effective on many 2D vision tasks, it is still challenging to apply them to 3D tasks…

Computer Vision and Pattern Recognition · Computer Science 2018-08-03 Zhuotun Zhu , Yingda Xia , Wei Shen , Elliot K. Fishman , Alan L. Yuille

Image segmentation is a fundamental task in the field of imaging and vision. Supervised deep learning for segmentation has achieved unparalleled success when sufficient training data with annotated labels are available. However, annotation…

Image and Video Processing · Electrical Eng. & Systems 2023-04-10 Hongrun Zhang , Liam Burrows , Yanda Meng , Declan Sculthorpe , Abhik Mukherjee , Sarah E Coupland , Ke Chen , Yalin Zheng

Polyp segmentation is a crucial step towards computer-aided diagnosis of colorectal cancer. However, most of the polyp segmentation methods require pixel-wise annotated datasets. Annotated datasets are tedious and time-consuming to produce,…

Computer Vision and Pattern Recognition · Computer Science 2022-11-23 Guangyu Ren , Michalis Lazarou , Jing Yuan , Tania Stathaki

Medical experts often manually segment images to obtain diagnostic statistics and discard the resulting annotations. We aim to train segmentation models to alleviate this burden, but constrained to the retained summary statistics (e.g., the…

Computer Vision and Pattern Recognition · Computer Science 2026-05-06 Omkar Kulkarni , Edward Raff , Tim Oates

Since acquiring pixel-wise annotations for training convolutional neural networks for semantic image segmentation is time-consuming, weakly supervised approaches that only require class tags have been proposed. In this work, we propose…

Computer Vision and Pattern Recognition · Computer Science 2019-05-17 Johann Sawatzky , Debayan Banerjee , Juergen Gall

Though performed almost effortlessly by humans, segmenting 2D gray-scale or color images into respective regions of interest (e.g.~background, objects, or portions of objects) constitutes one of the greatest challenges in science and…

Computer Vision and Pattern Recognition · Computer Science 2023-08-23 Alexandre Benatti , Luciano da F. Costa

Learning from weakly-supervised data is one of the main challenges in machine learning and computer vision, especially for tasks such as image semantic segmentation where labeling is extremely expensive and subjective. In this paper, we…

Computer Vision and Pattern Recognition · Computer Science 2016-12-09 Xianming Liu , Amy Zhang , Tobias Tiecke , Andreas Gros , Thomas S. Huang

3D image segmentation plays an important role in biomedical image analysis. Many 2D and 3D deep learning models have achieved state-of-the-art segmentation performance on 3D biomedical image datasets. Yet, 2D and 3D models have their own…

Computer Vision and Pattern Recognition · Computer Science 2018-12-11 Hao Zheng , Yizhe Zhang , Lin Yang , Peixian Liang , Zhuo Zhao , Chaoli Wang , Danny Z. Chen

In this paper we address the problem of representing 3D visual data with parameterized volumetric shape primitives. Specifically, we present a (two-stage) approach built around convolutional neural networks (CNNs) capable of segmenting…

Computer Vision and Pattern Recognition · Computer Science 2020-01-29 Jaka Šircelj , Tim Oblak , Klemen Grm , Uroš Petković , Aleš Jaklič , Peter Peer , Vitomir Štruc , Franc Solina

Action segmentation is the task of temporally segmenting every frame of an untrimmed video. Weakly supervised approaches to action segmentation, especially from transcripts have been of considerable interest to the computer vision…

Computer Vision and Pattern Recognition · Computer Science 2021-10-22 Yaser Souri , Alexander Richard , Luca Minciullo , Juergen Gall

Deep learning-based medical image segmentation and surface mesh generation typically involve a sequential pipeline from image to segmentation to meshes, often requiring large training datasets while making limited use of prior geometric…

Medical image segmentation is a fundamental and critical step in many image-guided clinical approaches. Recent success of deep learning-based segmentation methods usually relies on a large amount of labeled data, which is particularly…

Computer Vision and Pattern Recognition · Computer Science 2023-11-15 Rushi Jiao , Yichi Zhang , Le Ding , Rong Cai , Jicong Zhang

We introduce the problem of weakly supervised Multi-Object Tracking and Segmentation, i.e. joint weakly supervised instance segmentation and multi-object tracking, in which we do not provide any kind of mask annotation. To address it, we…

Computer Vision and Pattern Recognition · Computer Science 2021-01-05 Idoia Ruiz , Lorenzo Porzi , Samuel Rota Bulò , Peter Kontschieder , Joan Serrat

Open-vocabulary segmentation of 3D scenes is a fundamental function of human perception and thus a crucial objective in computer vision research. However, this task is heavily impeded by the lack of large-scale and diverse 3D…

Computer Vision and Pattern Recognition · Computer Science 2024-01-10 Kunhao Liu , Fangneng Zhan , Jiahui Zhang , Muyu Xu , Yingchen Yu , Abdulmotaleb El Saddik , Christian Theobalt , Eric Xing , Shijian Lu