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Recently, text-to-molecule models have shown great potential across various chemical applications, e.g., drug-discovery. These models adapt language models to molecular data by representing molecules as sequences of atoms. However, they…

Computation and Language · Computer Science 2025-09-18 Seojin Kim , Hyeontae Song , Jaehyun Nam , Jinwoo Shin

The generative modeling landscape has experienced tremendous growth in recent years, particularly in generating natural images and art. Recent techniques have shown impressive potential in creating complex visual compositions while…

Computer Vision and Pattern Recognition · Computer Science 2023-12-19 Juan A Rodriguez , David Vazquez , Issam Laradji , Marco Pedersoli , Pau Rodriguez

Many time reviewers fail to appreciate novel ideas of a researcher and provide generic feedback. Thus, proper assignment of reviewers based on their area of expertise is necessary. Moreover, reading each and every paper from end-to-end for…

Computation and Language · Computer Science 2021-05-05 Sohom Ghosh , Ankush Chopra

Recent developments in transformer-based language models have allowed them to capture a wide variety of world knowledge that can be adapted to downstream tasks with limited resources. However, what pieces of information are understood in…

Computation and Language · Computer Science 2024-01-31 Shrayani Mondal , Rishabh Garodia , Arbaaz Qureshi , Taesung Lee , Youngja Park

Automatic phenotyping is a task of identifying cohorts of patients that match a predefined set of criteria. Phenotyping typically involves classifying long clinical documents that contain thousands of tokens. At the same time, recent…

Computation and Language · Computer Science 2021-05-17 Xin Su , Timothy Miller , Xiyu Ding , Majid Afshar , Dmitriy Dligach

Recently, neural models led to significant improvements in both machine translation (MT) and natural language generation tasks (NLG). However, generation of long descriptive summaries conditioned on structured data remains an open…

Computation and Language · Computer Science 2019-11-01 Fahimeh Saleh , Alexandre Bérard , Ioan Calapodescu , Laurent Besacier

We present MatSci-NLP, a natural language benchmark for evaluating the performance of natural language processing (NLP) models on materials science text. We construct the benchmark from publicly available materials science text data to…

Computation and Language · Computer Science 2023-05-16 Yu Song , Santiago Miret , Bang Liu

In this paper, we introduce DOCmT5, a multilingual sequence-to-sequence language model pretrained with large scale parallel documents. While previous approaches have focused on leveraging sentence-level parallel data, we try to build a…

Computation and Language · Computer Science 2022-05-06 Chia-Hsuan Lee , Aditya Siddhant , Viresh Ratnakar , Melvin Johnson

Platforms that support online commentary, from social networks to news sites, are increasingly leveraging machine learning to assist their moderation efforts. But this process does not typically provide feedback to the author that would…

Computation and Language · Computer Science 2021-02-12 Leo Laugier , John Pavlopoulos , Jeffrey Sorensen , Lucas Dixon

This work describes the adaptation of a pretrained sequence-to-sequence model to the task of scientific claim verification in the biomedical domain. We propose VERT5ERINI that exploits T5 for abstract retrieval, sentence selection and label…

Computation and Language · Computer Science 2020-10-23 Ronak Pradeep , Xueguang Ma , Rodrigo Nogueira , Jimmy Lin

Developing high-performance entity normalization algorithms that can alleviate the term variation problem is of great interest to the biomedical community. Although deep learning-based methods have been successfully applied to biomedical…

Information Retrieval · Computer Science 2019-08-12 Zongcheng Ji , Qiang Wei , Hua Xu

In this work, we present the Chatbot Interaction with Artificial Intelligence (CI-AI) framework as an approach to the training of deep learning chatbots for task classification. The intelligent system augments human-sourced data via…

Computation and Language · Computer Science 2020-10-23 Jordan J. Bird , Anikó Ekárt , Diego R. Faria

Digital libraries that maintain extensive textual collections may want to further enrich their content for certain downstream applications, e.g., building knowledge graphs, semantic enrichment of documents, or implementing novel access…

Digital Libraries · Computer Science 2024-11-21 Hermann Kroll , Pascal Sackhoff , Bill Matthias Thang , Maha Ksouri , Wolf-Tilo Balke

The extraction and analysis of insights from medical data, primarily stored in free-text formats by healthcare workers, presents significant challenges due to its unstructured nature. Medical coding, a crucial process in healthcare, remains…

Computation and Language · Computer Science 2024-05-28 Mikhail Kulyabin , Gleb Sokolov , Aleksandr Galaida , Andreas Maier , Tomas Arias-Vergara

The value of text classification's future research has encountered challenges and uncertainties, due to the extraordinary efficacy demonstrated by large language models (LLMs) across numerous downstream NLP tasks. In this era of open-ended…

Computation and Language · Computer Science 2024-02-19 Yazhou Zhang , Mengyao Wang , Chenyu Ren , Qiuchi Li , Prayag Tiwari , Benyou Wang , Jing Qin

Numerical reasoning over text (NRoT) presents unique challenges that are not well addressed by existing pre-training objectives. We explore five sequential training schedules that adapt a pre-trained T5 model for NRoT. Our final model is…

Computation and Language · Computer Science 2021-05-17 Peng-Jian Yang , Ying Ting Chen , Yuechan Chen , Daniel Cer

Encoder-based transformer models are central to biomedical and clinical Natural Language Processing (NLP), as their bidirectional self-attention makes them well-suited for efficiently extracting structured information from unstructured text…

Recent advances in machine learning have made revolutionary breakthroughs in computer games, image and natural language understanding, and scientific discovery. Foundation models and large-scale language models (LLMs) have recently achieved…

Neurons and Cognition · Quantitative Biology 2023-10-31 Ran Wang , Zhe Sage Chen

The recent success of question answering systems is largely attributed to pre-trained language models. However, as language models are mostly pre-trained on general domain corpora such as Wikipedia, they often have difficulty in…

Computation and Language · Computer Science 2019-09-19 Wonjin Yoon , Jinhyuk Lee , Donghyeon Kim , Minbyul Jeong , Jaewoo Kang

Automatic keyphrase labelling stands for the ability of models to retrieve words or short phrases that adequately describe documents' content. Previous work has put much effort into exploring extractive techniques to address this task;…

Information Retrieval · Computer Science 2024-09-26 Jorge Gabín , M. Eduardo Ares , Javier Parapar
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