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We consider two closely related problems: anomaly detection in sensor networks and testing for infections in human populations. In both problems, we have $n$ nodes (sensors, humans), and each node exhibits an event of interest (anomaly,…

Information Theory · Computer Science 2020-12-01 Melih Bastopcu , Sennur Ulukus

A contact-tracing strategy has been deemed necessary to contain the spread of COVID-19 following the relaxation of lockdown measures. Using an agent-based model, we explore one of the technology-based strategies proposed, a contact-tracing…

Computers and Society · Computer Science 2020-12-18 Jonatan Almagor , Stefano Picascia

Contacts between people are the absolute drivers of contagious respiratory infections. For this reason, limiting and tracking contacts is a key strategy for the control of the COVID-19 epidemic. Digital contact tracing has been proposed as…

Computers and Society · Computer Science 2022-12-01 Chiara Boldrini , Andrea Passarella , Marco Conti

\emph{Group Testing} (GT) addresses the problem of identifying a small subset of defective items from a large population, by grouping items into as few test pools as possible. In \emph{Adaptive GT} (AGT), outcomes of previous tests can…

Information Theory · Computer Science 2020-08-17 Alejandro Cohen , Asaf Cohen , Omer Gurewitz

Testing, contact tracing, and isolation (TTI) is an epidemic management and control approach that is difficult to implement at scale because it relies on manual tracing of contacts. Exposure notification apps have been developed to…

In this paper, we introduce a variation of the group testing problem capturing the idea that a positive test requires a combination of multiple ``types'' of item. Specifically, we assume that there are multiple disjoint \emph{semi-defective…

Information Theory · Computer Science 2024-05-10 Thach V. Bui , Jonathan Scarlett

We consider the dynamic infection spread model that is based on the discrete SIR model which assumes infections to be spread over time via infected and non-isolated individuals. In our system, the main objective is not to minimize the…

Systems and Control · Electrical Eng. & Systems 2022-05-23 Batuhan Arasli , Sennur Ulukus

Contact tracing data collected from disease outbreaks has received relatively little attention in the epidemic modelling literature because it is thought to be unreliable: infection sources might be wrongly attributed, or data might be…

Methodology · Statistics 2012-03-16 Chris Jewell , Gareth Roberts

There is growing use of technology-enabled contact tracing, the process of identifying potentially infected COVID-19 patients by notifying all recent contacts of an infected person. Governments, technology companies, and research groups…

Computers and Society · Computer Science 2020-12-18 Lucy Simko , Jack Lucas Chang , Maggie Jiang , Ryan Calo , Franziska Roesner , Tadayoshi Kohno

Infectious diseases typically spread over a contact network with millions of individuals, whose sheer size is a tremendous challenge to analysing and controlling an epidemic outbreak. For some contact networks, it is possible to group…

Physics and Society · Physics 2021-07-23 Bastian Prasse , Karel Devriendt , Piet Van Mieghem

We propose `Tapestry', a novel approach to pooled testing with application to COVID-19 testing with quantitative Reverse Transcription Polymerase Chain Reaction (RT-PCR) that can result in shorter testing time and conservation of reagents…

Contact tracing is an effective tool in controlling the spread of infectious diseases such as COVID-19. It involves digital monitoring and recording of physical proximity between people over time with a central and trusted authority, so…

Cryptography and Security · Computer Science 2023-03-13 Craig Gotsman , Kai Hormann

COVID-19 has resulted in a global health crisis that may become even more acute over the upcoming months. One of the main reasons behind the current rapid growth of COVID-19 in the U.S. population is the limited availability of testing kits…

Information Theory · Computer Science 2020-04-13 Krishna R. Narayanan , Anoosheh Heidarzadeh , Ramanan Laxminarayan

The use of group testing to locate all instances of disease in a large population of blood samples was first considered seventy years ago. Since then, several methods have been used to approximate the minimum expected number of tests. The…

Applications · Statistics 2015-03-24 Seth Zimmerman

When the infection prevalence of a disease is low, Dorfman showed 80 years ago that testing groups of people can prove more efficient than testing people individually. Our goal in this paper is to propose new group testing algorithms that…

Methodology · Statistics 2020-07-23 Marco Cuturi , Olivier Teboul , Quentin Berthet , Arnaud Doucet , Jean-Philippe Vert

In response to the COVID-19 pandemic, Bluetooth-based contact tracing has been deployed in many countries with the help of the developers of smartphone operating systems that provide APIs for privacy-preserving exposure notification.…

Cryptography and Security · Computer Science 2021-03-16 Kenji Saito , Mitsuru Iwamura

Several contact tracing solutions have been proposed and implemented all around the globe to combat the spread of COVID-19 pandemic. But, most of these solutions endanger the privacy rights of the individuals and hinder their widespread…

Cryptography and Security · Computer Science 2020-08-18 Priyanka Singh , Abhishek Singh , Gabriel Cojocaru , Praneeth Vepakomma , Ramesh Raskar

We study the group testing problem where the goal is to identify a set of k infected individuals carrying a rare disease within a population of size n, based on the outcomes of pooled tests which return positive whenever there is at least…

Machine Learning · Statistics 2022-06-16 Amin Coja-Oghlan , Oliver Gebhard , Max Hahn-Klimroth , Alexander S. Wein , Ilias Zadik

Repeated asymptomatic screening for SARS-CoV-2 promises to control spread of the virus but would require too many resources to implement at scale. Group testing is promising for screening more people with fewer test resources: multiple…

Populations and Evolution · Quantitative Biology 2020-11-18 Yifan Lin , Yuxuan Ren , Jingyuan Wan , Massey Cashore , Jiayue Wan , Yujia Zhang , Peter Frazier , Enlu Zhou

The ongoing COVID-19 pandemic is the first epidemic in human history in which digital contact-tracing has been deployed at a global scale. Tracking and quarantining all the contacts of individuals who test positive to a virus can help…

Physics and Society · Physics 2021-02-26 Aleix Bassolas , Andrea Santoro , Sandro Sousa , Silvia Rognone , Vincenzo Nicosia
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