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Dynamic models - often deterministic in nature - were used to estimate the basic reproductive number, R_0, of the 2014-5 Ebola virus disease (EVD) epidemic outbreak in West Africa. Estimates of R_0 were then used to project the likelihood…

Populations and Evolution · Quantitative Biology 2016-01-27 Bradford P Taylor , Jonathan Dushoff , Joshua S Weitz

Phylodynamics is a set of population genetics tools that aim at reconstructing demographic history of a population based on molecular sequences of individuals sampled from the population of interest. One important task in phylodynamics is…

Populations and Evolution · Quantitative Biology 2019-02-26 Mingwei Tang , Gytis Dudas , Trevor Bedford , Vladimir N. Minin

This paper proposes a novel evolutionary algorithm called Epistocracy which incorporates human socio-political behavior and intelligence to solve complex optimization problems. The inspiration of the Epistocracy algorithm originates from a…

Neural and Evolutionary Computing · Computer Science 2021-02-02 Seyed Ziae Mousavi Mojab , Seyedmohammad Shams , Hamid Soltanian-Zadeh , Farshad Fotouhi

${\bf Background:}$ The early growth dynamics of the West African Ebola virus epidemic has been qualitatively different for Guinea, Sierra Leone and Liberia. However, it is important to understand these disparate dynamics as trends of a…

Populations and Evolution · Quantitative Biology 2014-10-21 Maria Kiskowski

Estimation of distribution algorithms (EDA) are stochastic optimization algorithms. EDA establishes a probability model to describe the distribution of solution from the perspective of population macroscopically by statistical learning…

Neural and Evolutionary Computing · Computer Science 2020-03-19 Zhenyu Liang , Yunfan Li , Zhongwei Wan

Many real world problems are NP-Hard problems are a very large part of them can be represented as graph based problems. This makes graph theory a very important and prevalent field of study. In this work a new bio-inspired meta-heuristics…

Neural and Evolutionary Computing · Computer Science 2013-10-15 Chiranjib Sur , Anupam Shukla

Evolutionary algorithms (EA) have been widely accepted as efficient solvers for complex real world optimization problems, including engineering optimization. However, real world optimization problems often involve uncertain environment…

Neural and Evolutionary Computing · Computer Science 2016-11-17 Maumita Bhattacharya , R. Islam , A. Mahmood

Agents of any metaheuristic algorithms are moving in two modes, namely exploration and exploitation. Obtaining robust results in any algorithm is strongly dependent on how to balance between these two modes. Whale optimization algorithm as…

This paper presents an Improved Bayesian Optimization (IBO) algorithm to solve complex high-dimensional epidemic models' optimal control solution. Evaluating the total objective function value for disease control models with hundreds of…

Methodology · Statistics 2021-08-03 Yuyang Chen , Kaiming Bi , Chih-Hang J. Wu , David Ben-Arieh , Ashesh Sinha

The problem of finding the optimal placement of emergency exits in an indoor environment to facilitate the rapid and orderly evacuation of crowds is addressed in this work. A cellular-automaton model is used to simulate the behavior of…

Neural and Evolutionary Computing · Computer Science 2024-05-29 Carlos Cotta , José E. Gallardo

A new model for evolving Evolutionary Algorithms (EAs) is proposed in this paper. The model is based on the Multi Expression Programming (MEP) technique. Each MEP chromosome encodes an evolutionary pattern that is repeatedly used for…

Neural and Evolutionary Computing · Computer Science 2021-10-13 Mihai Oltean

Estimation of Distribution Algorithms have been proposed as a new paradigm for evolutionary optimization. This paper focuses on the parallelization of Estimation of Distribution Algorithms. More specifically, the paper discusses how to…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Jiri Ocenasek , Martin Pelikan

Phylogeographic methods aim to infer migration trends and the history of sampled lineages from genetic data. Applications of phylogeography are broad, and in the context of pathogens include the reconstruction of transmission histories and…

Populations and Evolution · Quantitative Biology 2015-03-30 Nicola De Maio , Chieh-Hsi Wu , Kathleen M O'Reilly , Daniel Wilson

Bat Algorithm (BA) is a nature-inspired metaheuristic search algorithm designed to efficiently explore complex problem spaces and find near-optimal solutions. The algorithm is inspired by the echolocation behavior of bats, which acts as a…

Neural and Evolutionary Computing · Computer Science 2024-07-23 Shahla U. Umar , Tarik A. Rashid , Aram M. Ahmed , Bryar A. Hassan , Mohammed Rashad Baker

Evolutionary optimization is a generic population-based metaheuristic that can be adapted to solve a wide variety of optimization problems and has proven very effective for combinatorial optimization problems. However, the potential of this…

Multiagent Systems · Computer Science 2020-09-03 Saaduddin Mahmud , Moumita Choudhury , Md. Mosaddek Khan , Long Tran-Thanh , Nicholas R. Jennings

An Ebola outbreak of unparalleled size is currently affecting several countries in West Africa, and international efforts to control the outbreak are underway. However, the efficacy of these interventions, and their likely impact on an…

Populations and Evolution · Quantitative Biology 2014-09-23 Caitlin M. Rivers , Eric T. Lofgren , Madhav Marathe , Stephen Eubank , Bryan L. Lewis

We study a resource allocation problem for containing an infectious disease in a metapopulation subject to resource uncertainty. We propose a two-stage model where the policy maker seeks to allocate resources in both stages where the second…

Optimization and Control · Mathematics 2020-06-03 Ceyda Yaba Best , Amin Khademi , Burak Eksioglu

We use a multivariate formulation of sequential Monte Carlo filter that utilizes mechanistic models for Ebola virus propagation and available incidence data to simultaneously estimate the disease progression states and the model parameters.…

Finding a large set of optima in a multimodal optimization landscape is a challenging task. Classical population-based evolutionary algorithms typically converge only to a single solution. While this can be counteracted by applying niching…

Neural and Evolutionary Computing · Computer Science 2023-10-10 Benjamin Doerr , Martin S. Krejca

A major Ebola outbreak occurs in West Africa since March 2014, being the deadliest epidemic in history. As an infectious disease epidemiology, Ebola is the most lethal and is moving faster than in previous outbreaks. On 8 August 2014, the…

Optimization and Control · Mathematics 2016-09-07 Amira Rachah , Delfim F. M. Torres