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This article describes blavaan, an R package for estimating Bayesian structural equation models (SEMs) via JAGS and for summarizing the results. It also describes a novel parameter expansion approach for estimating specific types of models…

Computation · Statistics 2018-06-19 Edgar C. Merkle , Yves Rosseel

Modeling structure and behavior of software systems plays a crucial role in the industrial practice of software engineering. As with other software engineering artifacts, software models are subject to evolution. Supporting modelers in…

Software Engineering · Computer Science 2026-01-21 Christof Tinnes , Alisa Welter , Sven Apel

A method (Ember) for non-stationary spatial modelling with multiple secondary variables by combining Geostatistics with Random Forests is applied to a three-dimensional Reservoir Model. It extends the Random Forest method to an…

Computational Engineering, Finance, and Science · Computer Science 2020-11-12 Colin Daly

Prior work has shown that coupling sequential latent variable models with semantic ontological knowledge can improve the representational capabilities of event modeling approaches. In this work, we present a novel, doubly hierarchical,…

Computation and Language · Computer Science 2023-05-31 Shubhashis Roy Dipta , Mehdi Rezaee , Francis Ferraro

With the advent of technology and use of latest devices, they produces voluminous data. Out of it, 80% of the data are unstructured and remaining 20% are structured and semi-structured. The produced data are in heterogeneous format and…

Sequential sampling models (SSMs) are a widely used framework describing decision-making as a stochastic, dynamic process of evidence accumulation. SSMs popularity across cognitive science has driven the development of various software…

Mathematical Software · Computer Science 2025-12-17 Kianté Fernandez , Dominique Makowski , Christopher Fisher

Time series forecasting plays a significant role in finance, energy, meteorology, and IoT applications. Recent studies have leveraged the generalization capabilities of large language models (LLMs) to adapt to time series forecasting,…

Machine Learning · Computer Science 2026-05-12 Hao Liu , Xiaoxing Zhang , Chun Yang , Xiaobin Zhu

SfePy (Simple Finite Elements in Python) is a framework for solving various kinds of problems (mechanics, physics, biology, ...) described by partial differential equations in two or three space dimensions by the finite element method. The…

Computational Engineering, Finance, and Science · Computer Science 2014-04-30 Robert Cimrman

We present $\textbf{PyRMLE}$, a Python module that implements Regularized Maximum Likelihood Estimation for the analysis of Random Coefficient models. $\textbf{PyRMLE}$ is simple to use and readily works with data formats that are typical…

Computation · Statistics 2021-08-17 Emil Mendoza , Fabian Dunker , Marco Reale

As demand for computer software continually increases, software scope and complexity become higher than ever. The software industry is in real need of accurate estimates of the project under development. Software development effort…

Software Engineering · Computer Science 2020-07-06 Halcyon D. P. Carvalho , Marília N. C. A. Lima , Wylliams B. Santos , Roberta A. de A. Fagunde

This work presents the concept of kernel mean embedding and kernel probabilistic programming in the context of stochastic systems. We propose formulations to represent, compare, and propagate uncertainties for fairly general stochastic…

Machine Learning · Statistics 2020-05-05 Jia-Jie Zhu , Krikamol Muandet , Moritz Diehl , Bernhard Schölkopf

A novel data-driven methodology is presented for the joint selection of prior parameters for both fixed and random effects in Linear Mixed Models (LMMs). This approach facilitates the estimation of complex random-effects structures, as well…

Methodology · Statistics 2026-04-28 Matteo Amestoy , R. Vermeulen , Mark A. van de Wiel , Wessel N. van Wieringen

Multimodal foundation models can process several modalities. However, since the space of possible modalities is large and evolving over time, training a model from scratch to encompass all modalities is unfeasible. Moreover, integrating a…

Computation and Language · Computer Science 2025-09-08 Osman Batur İnce , André F. T. Martins , Oisin Mac Aodha , Edoardo M. Ponti

Ordinary Differential Equations (ODE) are used throughout science where the capture of rates of change in states is sought. While both pieces of commercial and open software exist to study such systems, their efficient and accurate usage…

Mathematical Software · Computer Science 2018-03-20 Edwin Tye , Tom Finnie , Ian Hall , Steve Leach

SfePy (Simple finite elements in Python) is a software for solving various kinds of problems described by partial differential equations in one, two or three spatial dimensions by the finite element method. Its source code is mostly (85\%)…

Mathematical Software · Computer Science 2019-08-20 Robert Cimrman , Vladimír Lukeš , Eduard Rohan

We present a flexible tool, called General Effect Modelling (GEM), for the analysis of any multivariate data influenced by one or more qualitative (categorical) or quantitative (continuous) input variables. The variables can be design…

Methodology · Statistics 2024-04-05 Ellen Færgestad Mosleth , Kristian Hovde Liland

It is well recognized that the project productivity is a key driver in estimating software project effort from Use Case Point size metric at early software development stages. Although, there are few proposed models for predicting…

Machine Learning · Computer Science 2018-12-18 Mohammad Azzeh , Ali Bou Nassif , Shadi Banitaan , Cuauhtemoc Lopez-Martin

In recent years, the need for semantic segmentation has arisen across several different applications and environments. However, the expense and redundancy of annotation often limits the quantity of labels available for training in any…

Computer Vision and Pattern Recognition · Computer Science 2019-09-25 Tarun Kalluri , Girish Varma , Manmohan Chandraker , C V Jawahar

Protein language models (PLMs) have shown promise in improving the understanding of protein sequences, contributing to advances in areas such as function prediction and protein engineering. However, training these models from scratch…

Machine Learning · Computer Science 2024-12-19 Shivasankaran Vanaja Pandi , Bharath Ramsundar

Large language models (LLMs) have demonstrated remarkable capabilities in generating programs from natural language descriptions, yet ensuring their correctness without an external oracle remains a critical challenge. To solve the…

Software Engineering · Computer Science 2026-04-07 Yunxiang Wei , Tianlin Li , Yuwei Zheng , Yanni Dong , Aishan Liu , Qiang Hu , Xiaoyu Zhang , Mingfei Cheng , Jian Yang