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Related papers: OntoGUM: Evaluating Contextualized SOTA Coreferenc…

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Large Language Models (LLMs) perform well on many reasoning benchmarks, yet existing evaluations rarely assess their ability to distinguish between meaningful semantic relations and genuine unrelatedness. We introduce CORE (Comprehensive…

Background: Several studies show that large language models (LLMs) struggle with phenotype-driven gene prioritization for rare diseases. These studies typically use Human Phenotype Ontology (HPO) terms to prompt foundation models like GPT…

Computation and Language · Computer Science 2026-02-19 Zhanliang Wang , Da Wu , Quan Nguyen , Kai Wang

Single-source open-domain generalization (SS-ODG) addresses the challenge of labeled source domains with supervision during training and unlabeled novel target domains during testing. The target domain includes both known classes from the…

Computer Vision and Pattern Recognition · Computer Science 2023-11-07 Prathmesh Bele , Valay Bundele , Avigyan Bhattacharya , Ankit Jha , Gemma Roig , Biplab Banerjee

Named Entity Recognition (NER) is a well-studied problem in NLP. However, there is much less focus on studying NER datasets, compared to developing new NER models. In this paper, we employed three simple techniques to detect annotation…

Computation and Language · Computer Science 2024-06-28 Gabriel Bernier-Colborne , Sowmya Vajjala

Ontology Alignment (OA) is essential for enabling semantic interoperability across heterogeneous knowledge systems. While recent advances have focused on large language models (LLMs) for capturing contextual semantics, this work revisits…

Artificial Intelligence · Computer Science 2025-10-01 Hamed Babaei Giglou , Jennifer D'Souza , Sören Auer , Mahsa Sanaei

While performance of many text classification tasks has been recently improved due to Pre-trained Language Models (PLMs), in this paper we show that they still suffer from a performance gap when the underlying distribution of topics…

Computation and Language · Computer Science 2023-11-28 Dmitri Roussinov , Serge Sharoff

Challenge sets such as the Winograd Schema Challenge (WSC) are used to benchmark systems' ability to resolve ambiguities in natural language. If one assumes as in existing work that solving a given challenge set is at least as difficult as…

Computation and Language · Computer Science 2024-10-15 Ian Porada , Jackie Chi Kit Cheung

Language Models are the underpin of all modern Natural Language Processing (NLP) tasks. The introduction of the Transformers architecture has contributed significantly into making Language Modeling very effective across many NLP task,…

Computation and Language · Computer Science 2021-11-05 Nikolaos Stylianou , Ioannis Vlahavas

Cross-domain recommendation (CDR) is crucial for improving recommendation accuracy and generalization, yet traditional methods are often hindered by the reliance on shared user/item IDs, which are unavailable in most real-world scenarios.…

Information Retrieval · Computer Science 2025-11-18 Peiyu Hu , Wayne Lu , Jia Wang

People enjoy sharing "notes" including their experiences within online communities. Therefore, recommending notes aligned with user interests has become a crucial task. Existing online methods only input notes into BERT-based models to…

Information Retrieval · Computer Science 2024-03-26 Chao Zhang , Shiwei Wu , Haoxin Zhang , Tong Xu , Yan Gao , Yao Hu , Di Wu , Enhong Chen

We present our participation in the SOMD 2026 shared task on cross-document software mention coreference resolution, where our systems ranked second across all three subtasks. We compare two fine-tuning-free approaches: Fuzzy Matching (FM),…

Computation and Language · Computer Science 2026-04-03 Atilla Kaan Alkan , Felix Grezes , Jennifer Lynn Bartlett , Anna Kelbert , Kelly Lockhart , Alberto Accomazzi

Standardizing food terms from product labels and menus into ontology concepts is a prerequisite for trustworthy dietary assessment and safety reporting. The dominant approach to Named Entity Linking (NEL) in the food and nutrition domains…

Computation and Language · Computer Science 2026-03-11 Jan Drole , Ana Gjorgjevikj , Barbara Korouši'c Seljak , Tome Eftimov

A long-standing challenge in coreference resolution has been the incorporation of entity-level information - features defined over clusters of mentions instead of mention pairs. We present a neural network based coreference system that…

Computation and Language · Computer Science 2016-06-10 Kevin Clark , Christopher D. Manning

Retrieval-augmented generation (RAG) has improved large language models (LLMs) by using knowledge retrieval to overcome knowledge deficiencies. However, current RAG methods often fall short of ensuring the depth and completeness of…

Computation and Language · Computer Science 2025-02-11 Shengjie Ma , Chengjin Xu , Xuhui Jiang , Muzhi Li , Huaren Qu , Cehao Yang , Jiaxin Mao , Jian Guo

Retrieval-augmented generation (RAG) with large language models (LLMs) is especially valuable in specialized domains, where precision is critical. To more specialize the LLMs into a target domain, domain-specific RAG has recently been…

Computation and Language · Computer Science 2025-02-24 Juntae Lee , Jihwan Bang , Seunghan Yang , Kyuhong Shim , Simyung Chang

Although DNA foundation models have advanced the understanding of genomes, they still face significant challenges in the limited scale and diversity of genomic data. This limitation starkly contrasts with the success of natural language…

Genomics · Quantitative Biology 2024-02-14 Huixin Zhan , Ying Nian Wu , Zijun Zhang

Deep neural networks suffer from significant performance deterioration when there exists distribution shift between deployment and training. Domain Generalization (DG) aims to safely transfer a model to unseen target domains by only relying…

Computer Vision and Pattern Recognition · Computer Science 2023-08-09 Xin Zhang , Ying-Cong Chen

Automatic evaluation of retrieval augmented generation (RAG) systems relies on fine-grained dimensions like faithfulness and relevance, as judged by expert human annotators. Meta-evaluation benchmarks support the development of automatic…

Computation and Language · Computer Science 2025-07-22 María Andrea Cruz Blandón , Jayasimha Talur , Bruno Charron , Dong Liu , Saab Mansour , Marcello Federico

Large Language Models (LLMs) pose a new paradigm of modeling and computation for information tasks. Recommendation systems are a critical application domain poised to benefit significantly from the sequence modeling capabilities and world…

In this paper, we analyze and empirically show that the learned relevance for conventional information retrieval (IR) scenarios may be inconsistent in retrieval-augmented generation (RAG) scenarios. To bridge this gap, we introduce OpenRAG,…

Computation and Language · Computer Science 2025-03-12 Jiawei Zhou , Lei Chen