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Insects represent half of all global biodiversity, yet many of the world's insects are disappearing, with severe implications for ecosystems and agriculture. Despite this crisis, data on insect diversity and abundance remain woefully…

The LifeCLEF plant identification challenge aims at evaluating plant identification methods and systems at a very large scale, close to the conditions of a real-world biodiversity monitoring scenario. The 2016-th edition was actually…

Computer Vision and Pattern Recognition · Computer Science 2025-09-26 Herve Goeau , Pierre Bonnet , Alexis Joly

Plant diseases pose significant threats to agriculture. It necessitates proper diagnosis and effective treatment to safeguard crop yields. To automate the diagnosis process, image segmentation is usually adopted for precisely identifying…

Computer Vision and Pattern Recognition · Computer Science 2024-09-09 Tianqi Wei , Zhi Chen , Xin Yu , Scott Chapman , Paul Melloy , Zi Huang

Deep learning-based classification of herbarium images is hampered by background heterogeneity, which introduces noise and artifacts that can potentially mislead models and reduce classification accuracy. Addressing these background-related…

Computer Vision and Pattern Recognition · Computer Science 2025-07-23 Youcef Sklab , Florian Castanet , Hanane Ariouat , Souhila Arib , Jean-Daniel Zucker , Eric Chenin , Edi Prifti

Biodiversity research requires complete and detailed information to study ecosystem dynamics at different scales. Employing data-driven methods like Machine Learning is getting traction in ecology and more specific biodiversity, offering…

Quantitative Methods · Quantitative Biology 2025-10-27 Stylianos Stasinos , Martino Mensio , Elena Lazovik , Athanasios Trantas

Existing image classification datasets used in computer vision tend to have a uniform distribution of images across object categories. In contrast, the natural world is heavily imbalanced, as some species are more abundant and easier to…

Computer Vision and Pattern Recognition · Computer Science 2018-04-12 Grant Van Horn , Oisin Mac Aodha , Yang Song , Yin Cui , Chen Sun , Alex Shepard , Hartwig Adam , Pietro Perona , Serge Belongie

The digitization of natural history collections over the past three decades has unlocked a treasure trove of specimen imagery and metadata. There is great interest in making this data more useful by further labeling it with additional trait…

Computer Vision and Pattern Recognition · Computer Science 2024-11-25 Quentin Bateux , Jonathan Koss , Patrick W. Sweeney , Erika Edwards , Nelson Rios , Aaron M. Dollar

Quadrat images are essential for ecological studies, as they enable standardized sampling, the assessment of plant biodiversity, long-term monitoring, and large-scale field campaigns. These images typically cover an area of fifty…

Computer Vision and Pattern Recognition · Computer Science 2025-09-23 Giulio Martellucci , Herve Goeau , Pierre Bonnet , Fabrice Vinatier , Alexis Joly

Nematode worms are one of most abundant metazoan groups on the earth, occupying diverse ecological niches. Accurate recognition or identification of nematodes are of great importance for pest control, soil ecology, bio-geography, habitat…

Quantitative Methods · Quantitative Biology 2021-03-16 Xuequan Lu , Yihao Wang , Sheldon Fung , Xue Qing

In this article, we propose a novel approach for plant hierarchical taxonomy classification by posing the problem as an open class problem. It is observed that existing methods for medicinal plant classification often fail to perform…

Artificial Intelligence · Computer Science 2025-08-05 Soumen Sinha , Tanisha Rana , Susmita Ghosh , Rahul Roy

Accurate estimates of Above Ground Biomass (AGB) are essential in addressing two of humanity's biggest challenges: climate change and biodiversity loss. Existing datasets for AGB estimation from satellite imagery are limited. Either they…

Computer Vision and Pattern Recognition · Computer Science 2025-04-08 Ghjulia Sialelli , Torben Peters , Jan D. Wegner , Konrad Schindler

Since its beginning visual recognition research has tried to capture the huge variability of the visual world in several image collections. The number of available datasets is still progressively growing together with the amount of samples…

Computer Vision and Pattern Recognition · Computer Science 2014-02-25 Tatiana Tommasi , Tinne Tuytelaars , Barbara Caputo

Life finds a way. For sessile organisms like plants, the need to adapt to changes in the environment is even more poignant. For humanity, the need to develop crops that can grow in diverse environments and feed our growing population is an…

Quantitative Methods · Quantitative Biology 2024-08-15 Eugene Koh , Rohan Shawn Sunil , Hilbert Yuen In Lam , Marek Mutwil

Visually cataloging and quantifying the natural world requires pushing the boundaries of both detailed visual classification and counting at scale. Despite significant progress, particularly in crowd and traffic analysis, the fine-grained,…

Computer Vision and Pattern Recognition · Computer Science 2026-03-24 Jinyu Xu , Tianqi Hu , Xiaonan Hu , Letian Zhou , Songliang Cao , Meng Zhang , Hao Lu

Ecosystems are governed by dynamic processes such as competition for resources, reproduction and dispersal. These shape their biodiversity and how the system responds to change. Current approaches to modelling ecosystems, especially plants,…

Quantitative Methods · Quantitative Biology 2023-03-15 Claire L. Harris , Neil Brummitt , Christina A. Cobbold , Richard Reeve

This document describes the details and the motivation behind a new dataset we collected for the semi-supervised recognition challenge~\cite{semi-aves} at the FGVC7 workshop at CVPR 2020. The dataset contains 1000 species of birds sampled…

Computer Vision and Pattern Recognition · Computer Science 2021-03-15 Jong-Chyi Su , Subhransu Maji

Despite the ecological significance of invertebrates, global trait databases remain heavily biased toward vertebrates and plants, limiting comprehensive ecological analyses of high-diversity groups like ground beetles. Ground beetles…

The 2017-th edition of the LifeCLEF plant identification challenge is an important milestone towards automated plant identification systems working at the scale of continental floras with 10.000 plant species living mainly in Europe and…

Computer Vision and Pattern Recognition · Computer Science 2025-09-26 Herve Goeau , Pierre Bonnet , Alexis Joly

Global biodiversity is declining at an unprecedented rate, yet little information is known about most species and how their populations are changing. Indeed, some 90% of Earth's species are estimated to be completely unknown. Machine…

Computer Vision and Pattern Recognition · Computer Science 2025-11-18 Yuyan Chen , Nico Lang , B. Christian Schmidt , Aditya Jain , Yves Basset , Sara Beery , Maxim Larrivée , David Rolnick

With the world population projected to near 10 billion by 2050, minimizing crop damage and guaranteeing food security has never been more important. Machine learning has been proposed as a solution to quickly and efficiently identify…

Computer Vision and Pattern Recognition · Computer Science 2022-08-29 Frank Xiao