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The structure of real-world networks is usually difficult to characterize owing to the variation of topological scales, the nondyadic complex interactions, and the fluctuations in the network. We aim to address these problems by introducing…

Social and Information Networks · Computer Science 2019-09-25 Quoc Hoan Tran , Van Tuan Vo , Yoshihiko Hasegawa

To comprehend the hierarchical organization of large integrated systems, we introduce the hierarchical map equation, which reveals multilevel structures in networks. In this information-theoretic approach, we exploit the duality between…

Physics and Society · Physics 2011-04-12 M. Rosvall , C. T. Bergstrom

Diverse cognitive processes set different demands on locally segregated and globally integrated brain activity. However, it remains unclear how resting brains configure their functional organization to balance the demands on network…

Neurons and Cognition · Quantitative Biology 2022-04-25 Rong Wang , Mianxin Liu , Xinhong Cheng , Ying Wu , Andrea Hildebrandt , Changsong Zhou

The development of modern information technologies permits to collect and to analyze huge amounts of statistical data in different spheres of life. The main problem is not to only to collect but to process all relevant information. The…

Information Retrieval · Computer Science 2010-07-08 O. Mryglod , Yu. Holovatch

Networks are a fundamental model of complex systems throughout the sciences, and network datasets are typically analyzed through lower-order connectivity patterns described at the level of individual nodes and edges. However, higher-order…

Social and Information Networks · Computer Science 2018-02-21 Austin R. Benson

A core feature of complex systems is that the interactions between elements in the present causally constrain each-other as the system evolves through time. To fully model all of these interactions (between elements, as well as ensembles of…

Neurons and Cognition · Quantitative Biology 2023-04-26 Thomas F. Varley

Availability of large, diverse, and multi-national datasets is crucial for the development of effective and clinically applicable AI systems in the medical imaging domain. However, forming a global model by bringing these datasets together…

Machine Learning · Computer Science 2022-09-07 Ece Isik-Polat , Gorkem Polat , Altan Kocyigit , Alptekin Temizel

Network embedding which encodes all vertices in a network as a set of numerical vectors in accordance with it's local and global structures, has drawn widespread attention. Network embedding not only learns significant features of a…

Physics and Society · Physics 2017-04-20 Weiwei Gu , Li Gong , Xiandao Lou , Jiang Zhang

Motivation: Biological data and knowledge bases increasingly rely on Semantic Web technologies and the use of knowledge graphs for data integration, retrieval and federated queries. In the past years, feature learning methods that are…

Quantitative Methods · Quantitative Biology 2017-05-01 Mona Alshahrani , Mohammed Asif Khan , Omar Maddouri , Akira R Kinjo , Núria Queralt-Rosinach , Robert Hoehndorf

It has been observed that the input space of deep neural network classifiers can exhibit `fragmentation', where the model function rapidly changes class as the input space is traversed. The severity of this fragmentation tends to follow the…

What does the informational complexity of dynamical networked systems tell us about intrinsic mechanisms and functions of these complex systems? Recent complexity measures such as integrated information have sought to operationalize this…

Neural and Evolutionary Computing · Computer Science 2017-07-06 Xerxes D. Arsiwalla , Pedro A. M. Mediano , Paul F. M. J. Verschure

This article covers the problem of processing of Big Data that describe process of complex networks and network systems operation. It also introduces the notion of hierarchical network systems combination into associations and conglomerates…

Data Analysis, Statistics and Probability · Physics 2016-03-28 Olexandr Polishchuk , Dmytro Polishchuk , Maria Tyutyunnyk , Mykhailo Yadzhak

High-throughput techniques are leading to an explosive growth in the size of biological databases and creating the opportunity to revolutionize our understanding of life and disease. Interpretation of these data remains, however, a major…

Molecular Networks · Quantitative Biology 2009-11-11 Roger Guimera , Luis A. Nunes Amaral

In network science complex systems are represented as a mathematical graphs consisting of a set of nodes representing the components and a set of edges representing their interactions. The framework of networks has led to significant…

Physics and Society · Physics 2022-04-07 Alexandre Bovet , Hernán A. Makse

Analysis and modeling of networked objects are fundamental pieces of modern data mining. Most real-world networks, from biological to social ones, are known to have common structural properties. These properties allow us to model the growth…

Data Structures and Algorithms · Computer Science 2016-09-27 Takuya Akiba , Kenko Nakamura , Taro Takaguchi

NetFlow data is a popular network log format used by many network analysts and researchers. The advantages of using NetFlow over deep packet inspection are that it is easier to collect and process, and it is less privacy intrusive. Many…

Machine Learning · Computer Science 2025-01-09 Clinton Cao , Annibale Panichella , Sicco Verwer , Agathe Blaise , Filippo Rebecchi

We developed a tool for visualizing and analyzing large pre-trained vision models by mapping them onto the brain, thus exposing their hidden inside. Our innovation arises from a surprising usage of brain encoding: predicting brain fMRI…

Computer Vision and Pattern Recognition · Computer Science 2024-04-02 Huzheng Yang , James Gee , Jianbo Shi

Complex networks usually exhibit a rich architecture organized over multiple intertwined scales. Information pathways are expected to pervade these scales reflecting structural insights that are not manifest from analyses of the network…

Physics and Society · Physics 2022-09-16 Pablo Villegas , Andrea Gabrielli , Francesca Santucci , Guido Caldarelli , Tommaso Gili

How information is encoded in bio-molecular sequences is difficult to quantify since such an analysis usually requires sampling an exponentially large genetic space. Here we show how information theory reveals both robust and compressed…

Information Theory · Computer Science 2021-08-12 Nitash C G , Christoph Adami

Data deduplication, one of the key features of modern Big Data storage devices, is the process of removing replicas of data chunks stored by different users. Despite the importance of deduplication, several drawbacks of the method, such as…

Information Theory · Computer Science 2024-11-05 Yun-Han Li , Jin Sima , Ilan Shomorony , Olgica Milenkovic
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