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While information processing in complex systems can be described in abstract, general terms, there are cases in which the relation between these computations and the physical substrate of the underlying system is itself of interest.…

Neurons and Cognition · Quantitative Biology 2017-08-16 Pedro A. M. Mediano , Murray Shanahan

In neural networks, task-relevant information is represented jointly by groups of neurons. However, the specific way in which this mutual information about the classification label is distributed among the individual neurons is not well…

Information Theory · Computer Science 2023-06-08 David A. Ehrlich , Andreas C. Schneider , Viola Priesemann , Michael Wibral , Abdullah Makkeh

Complex biological networks are fundamental to biomedical science, capturing interactions among molecules, cells, genes, and tissues. Deciphering these networks is critical for understanding health and disease, yet their scale and…

Machine Learning · Computer Science 2025-12-09 Sakib Mostafa , Lei Xing , Md. Tauhidul Islam

Computing latent representations for graph-structured data is an ubiquitous learning task in many industrial and academic applications ranging from molecule synthetization to social network analysis and recommender systems. Knowledge graphs…

Neural and Evolutionary Computing · Computer Science 2023-08-25 Victor Caceres Chian , Marcel Hildebrandt , Thomas Runkler , Dominik Dold

Graph compression is a data analysis technique that consists in the replacement of parts of a graph by more general structural patterns in order to reduce its description length. It notably provides interesting exploration tools for the…

Data Structures and Algorithms · Computer Science 2018-07-19 Robin Lamarche-Perrin

The field of evolutionary many-task optimization (EMaTO) is increasingly recognized for its ability to streamline the resolution of optimization challenges with repetitive characteristics, thereby conserving computational resources. This…

Artificial Intelligence · Computer Science 2024-07-15 Yudong Yang , Kai Wu , Xiangyi Teng , Handing Wang , He Yu , Jing Liu

Multilayer networks preserve full information about the different interactions among the constituents of a complex system, and have recently proven quite useful in modelling transportation networks, social circles, and the human brain. A…

Physics and Society · Physics 2020-06-29 Andrea Santoro , Vincenzo Nicosia

The brain can be regarded as a network: a connected system where nodes, or units, represent different specialized regions and links, or connections, represent communication pathways. From a functional perspective communication is coded by…

Neurons and Cognition · Quantitative Biology 2014-09-10 Fabrizio De Vico Fallani , Jonas Richiardi , Mario Chavez , Sophie Achard

The family of Information Dispersal Algorithms is applied to distributed systems for secure and reliable storage and transmission. In comparison with perfect secret sharing it achieves a significantly smaller memory overhead and better…

Cryptography and Security · Computer Science 2017-05-30 Katarzyna Kapusta , Gerard Memmi , Hassan Noura

The space of possible behaviors complex biological systems may exhibit is unimaginably vast, and these systems often appear to be stochastic, whether due to variable noisy environmental inputs or intrinsically generated chaos. The brain is…

Neurons and Cognition · Quantitative Biology 2025-04-01 Jacob T. Crosser , Braden A. W. Brinkman

News recommender systems play an increasingly influential role in shaping information access within democratic societies. However, tailoring recommendations to users' specific interests can result in the divergence of information streams.…

Computation and Language · Computer Science 2023-09-19 Alessandra Polimeno , Myrthe Reuver , Sanne Vrijenhoek , Antske Fokkens

A major ambition of systems science is to uncover the building blocks of any biological network to decipher how cellular function emerges from their interactions. Here, we introduce a graph representation of the information flow in these…

Molecular Networks · Quantitative Biology 2020-06-15 Flaviano Morone , Ian Leifer , Hernan A. Makse

The brain is immensely complex, with diverse components and dynamic interactions building upon one another to orchestrate a wide range of functions and behaviors. Understanding patterns of these complex interactions and how they are…

Neurons and Cognition · Quantitative Biology 2024-08-06 Suman Kulkarni , Dani S. Bassett

A growing interest in complex networks theory results in an ongoing demand for new analytical tools. We propose a novel measure based on information theory that provides a new perspective for a better understanding of networked systems:…

Neurons and Cognition · Quantitative Biology 2019-05-30 Aline Viol , Vesna Vuksanović , Philipp Hövel

Real-world networks are often organized as modules or communities of similar nodes that serve as functional units. These networks are also rich in content, with nodes having distinguishing features or attributes. In order to discover a…

Social and Information Networks · Computer Science 2014-05-20 Laura M. Smith , Linhong Zhu , Kristina Lerman , Allon G. Percus

Intrinsic computation refers to how dynamical systems store, structure, and transform historical and spatial information. By graphing a measure of structural complexity against a measure of randomness, complexity-entropy diagrams display…

Chaotic Dynamics · Physics 2009-11-13 David P. Feldman , Carl S. McTague , James P. Crutchfield

Research on information diffusion generally assumes complete knowledge of the underlying network. However, in the presence of factors such as increasing privacy awareness, restrictions on application programming interfaces (APIs) and…

Social and Information Networks · Computer Science 2015-05-22 Václav Belák , Afra Mashhadi , Alessandra Sala , Donn Morrison

The apparent dichotomy between information-processing and dynamical approaches to complexity science forces researchers to choose between two diverging sets of tools and explanations, creating conflict and often hindering scientific…

Neurons and Cognition · Quantitative Biology 2022-01-26 Pedro A. M. Mediano , Fernando E. Rosas , Juan Carlos Farah , Murray Shanahan , Daniel Bor , Adam B. Barrett

The Integrated Information Theory provides a quantitative approach to consciousness and can be applied to neural networks. An embodied agent controlled by such a network influences and is being influenced by its environment. This involves,…

Neurons and Cognition · Quantitative Biology 2021-11-30 Carlotta Langer , Nihat Ay

Graph clustering is a fundamental computational problem with a number of applications in algorithm design, machine learning, data mining, and analysis of social networks. Over the past decades, researchers have proposed a number of…

Data Structures and Algorithms · Computer Science 2019-04-12 He Sun , Luca Zanetti