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Related papers: Joint Biomedical Entity and Relation Extraction wi…

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We target on the document-level relation extraction in an end-to-end setting, where the model needs to jointly perform mention extraction, coreference resolution (COREF) and relation extraction (RE) at once, and gets evaluated in an…

Computation and Language · Computer Science 2022-05-05 Liyan Xu , Jinho D. Choi

Background: Automatic extraction of chemical-disease relations (CDR) from unstructured text is of essential importance for disease treatment and drug development. Meanwhile, biomedical experts have built many highly-structured knowledge…

Computation and Language · Computer Science 2019-12-24 Huiwei Zhou , Chengkun Lang , Zhuang Liu , Shixian Ning , Yingyu Lin , Lei Du

Knowledge Bases (KBs) require constant up-dating to reflect changes to the world they represent. For general purpose KBs, this is often done through Relation Extraction (RE), the task of predicting KB relations expressed in text mentioning…

Computation and Language · Computer Science 2019-05-13 Peng Xu , Denilson Barbosa

Learning representations for knowledge base entities and concepts is becoming increasingly important for NLP applications. However, recent entity embedding methods have relied on structured resources that are expensive to create for new…

Computation and Language · Computer Science 2018-07-11 Denis Newman-Griffis , Albert M. Lai , Eric Fosler-Lussier

We introduce a novel graph-based framework for alleviating key challenges in distantly-supervised relation extraction and demonstrate its effectiveness in the challenging and important domain of biomedical data. Specifically, we propose a…

Machine Learning · Computer Science 2024-04-08 Hao Zhang , Yang Liu , Xiaoyan Liu , Tianming Liang , Gaurav Sharma , Liang Xue , Maozu Guo

Real-world knowledge graphs (KG) are mostly incomplete. The problem of recovering missing relations, called KG completion, has recently become an active research area. Knowledge graph (KG) embedding, a low-dimensional representation of…

Artificial Intelligence · Computer Science 2022-07-01 Minsang Kim , Seungjun Baek

Relation extraction (RE) has recently moved from the sentence-level to document-level, which requires aggregating document information and using entities and mentions for reasoning. Existing works put entity nodes and mention nodes with…

Computation and Language · Computer Science 2023-03-08 Hongfei Liu , Zhao Kang , Lizong Zhang , Ling Tian , Fujun Hua

Knowledge-enhanced pre-trained models for language representation have been shown to be more effective in knowledge base construction tasks (i.e.,~relation extraction) than language models such as BERT. These knowledge-enhanced language…

Computation and Language · Computer Science 2022-10-25 Jiacheng Li , Yannis Katsis , Tyler Baldwin , Ho-Cheol Kim , Andrew Bartko , Julian McAuley , Chun-Nan Hsu

Generative pre-trained transformer (GPT) models have shown promise in clinical entity and relation extraction tasks because of their precise extraction and contextual understanding capability. In this work, we further leverage the Unified…

Computation and Language · Computer Science 2024-07-16 Kriti Bhattarai , Inez Y. Oh , Zachary B. Abrams , Albert M. Lai

Joint Multimodal Entity-Relation Extraction (JMERE) is a challenging task that aims to extract entities and their relations from text-image pairs in social media posts. Existing methods for JMERE require large amounts of labeled data.…

Computation and Language · Computer Science 2025-03-25 Li Yuan , Yi Cai , Junsheng Huang

Most work in relation extraction forms a prediction by looking at a short span of text within a single sentence containing a single entity pair mention. This approach often does not consider interactions across mentions, requires redundant…

Computation and Language · Computer Science 2018-03-01 Patrick Verga , Emma Strubell , Andrew McCallum

Extracting information from full documents is an important problem in many domains, but most previous work focus on identifying relationships within a sentence or a paragraph. It is challenging to create a large-scale information extraction…

Computation and Language · Computer Science 2020-05-04 Sarthak Jain , Madeleine van Zuylen , Hannaneh Hajishirzi , Iz Beltagy

Event extraction is a classic task in natural language processing with wide use in handling large amount of yet rapidly growing financial, legal, medical, and government documents which often contain multiple events with their elements…

Computation and Language · Computer Science 2021-09-07 Kaihao Guo , Tianpei Jiang , Haipeng Zhang

Information Extraction (IE) from text refers to the task of extracting structured knowledge from unstructured text. The task typically consists of a series of sub-tasks such as Named Entity Recognition and Relation Extraction. Sourcing…

Computation and Language · Computer Science 2022-04-12 Yannis Papanikolaou , Marlene Staib , Justin Grace , Francine Bennett

Causal knowledge extraction is the task of extracting relevant causes and effects from text by detecting the causal relation. Although this task is important for language understanding and knowledge discovery, recent works in this domain…

Computation and Language · Computer Science 2023-08-09 Anik Saha , Oktie Hassanzadeh , Alex Gittens , Jian Ni , Kavitha Srinivas , Bulent Yener

Document-level relation extraction (DocRE) is a task that focuses on identifying relations between entities within a document. However, existing DocRE models often overlook the correlation between relations and lack a quantitative analysis…

Information Retrieval · Computer Science 2023-10-23 Yusheng Huang , Zhouhan Lin

Intelligently extracting and linking complex scientific information from unstructured text is a challenging endeavor particularly for those inexperienced with natural language processing. Here, we present a simple sequence-to-sequence…

Computation and Language · Computer Science 2022-12-13 Alexander Dunn , John Dagdelen , Nicholas Walker , Sanghoon Lee , Andrew S. Rosen , Gerbrand Ceder , Kristin Persson , Anubhav Jain

With so many articles of varying qualities being produced every moment, it is a very urgent task to screen outstanding articles and commit them to social media. To our best knowledge, there is a lack of datasets and mature research works in…

Computation and Language · Computer Science 2022-08-25 Chunhui Ai , Derui Wang , Xu Yan , Yang Xu , Wenrui Xie , Ziqiang Cao

Pretrained language models have shown success in many natural language processing tasks. Many works explore incorporating knowledge into language models. In the biomedical domain, experts have taken decades of effort on building large-scale…

Computation and Language · Computer Science 2021-04-22 Zheng Yuan , Yijia Liu , Chuanqi Tan , Songfang Huang , Fei Huang

Since real-world ubiquitous documents (e.g., invoices, tickets, resumes and leaflets) contain rich information, automatic document image understanding has become a hot topic. Most existing works decouple the problem into two separate tasks,…

Computer Vision and Pattern Recognition · Computer Science 2021-10-26 Peng Zhang , Yunlu Xu , Zhanzhan Cheng , Shiliang Pu , Jing Lu , Liang Qiao , Yi Niu , Fei Wu