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Hierarchical Clustering has been studied and used extensively as a method for analysis of data. More recently, Dasgupta [2016] defined a precise objective function. Given a set of $n$ data points with a weight function $w_{i,j}$ for each…

Data Structures and Algorithms · Computer Science 2021-11-15 Mirmahdi Rahgoshay , Mohammad R. Salavatipour

Hierarchical clustering (HC) is an important data analysis technique in which the goal is to recursively partition a dataset into a tree-like structure while grouping together similar data points at each level of granularity. Unfortunately,…

Data Structures and Algorithms · Computer Science 2025-06-09 Vladimir Braverman , Jon C. Ergun , Chen Wang , Samson Zhou

Hierarchical clustering has been a popular method in various data analysis applications. It partitions a data set into a hierarchical collection of clusters, and can provide a global view of (cluster) structure behind data across different…

Data Structures and Algorithms · Computer Science 2018-12-19 Dingkang Wang , Yusu Wang

This paper presents two efficient hierarchical clustering (HC) algorithms with respect to Dasgupta's cost function. For any input graph $G$ with a clear cluster-structure, our designed algorithms run in nearly-linear time in the input size…

Data Structures and Algorithms · Computer Science 2023-06-19 Steinar Laenen , Bogdan-Adrian Manghiuc , He Sun

Hierarchical clustering is a recursive partitioning of a dataset into clusters at an increasingly finer granularity. Motivated by the fact that most work on hierarchical clustering was based on providing algorithms, rather than optimizing a…

Data Structures and Algorithms · Computer Science 2017-04-10 Vincent Cohen-Addad , Varun Kanade , Frederik Mallmann-Trenn , Claire Mathieu

Hierarchical clustering studies a recursive partition of a data set into clusters of successively smaller size, and is a fundamental problem in data analysis. In this work we study the cost function for hierarchical clustering introduced by…

Data Structures and Algorithms · Computer Science 2021-12-17 Bogdan-Adrian Manghiuc , He Sun

Decision trees are popular machine learning models that are simple to build and easy to interpret. Even though algorithms to learn decision trees date back to almost 50 years, key properties affecting their generalization error are still…

Machine Learning · Computer Science 2020-10-16 Jean-Samuel Leboeuf , Frédéric LeBlanc , Mario Marchand

The objective of clustering is to discover natural groups in datasets and to identify geometrical structures which might reside there, without assuming any prior knowledge on the characteristics of the data. The problem can be seen as…

Computational Geometry · Computer Science 2018-01-26 Luis-Evaristo Caraballo , José-Miguel Díaz-Báñez , Nadine Kroher

Similarity-based Hierarchical Clustering (HC) is a classical unsupervised machine learning algorithm that has traditionally been solved with heuristic algorithms like Average-Linkage. Recently, Dasgupta reframed HC as a discrete…

Data Structures and Algorithms · Computer Science 2020-10-02 Ines Chami , Albert Gu , Vaggos Chatziafratis , Christopher Ré

The maximum modularity of a graph is a parameter widely used to describe the level of clustering or community structure in a network. Determining the maximum modularity of a graph is known to be NP-complete in general, and in practice a…

Data Structures and Algorithms · Computer Science 2022-12-22 Kitty Meeks , Fiona Skerman

This paper explores hierarchical clustering in the case where pairs of points have dissimilarity scores (e.g. distances) as a part of the input. The recently introduced objective for points with dissimilarity scores results in every tree…

Machine Learning · Computer Science 2020-09-01 Benjamin Moseley , Yuyan Wang

Arboricity is a graph parameter akin to chromatic number, in that it seeks to partition the vertices into the smallest number of sparse subgraphs. Where for the chromatic number we are partitioning the vertices into independent sets, for…

Hierarchical Clustering is an unsupervised data analysis method which has been widely used for decades. Despite its popularity, it had an underdeveloped analytical foundation and to address this, Dasgupta recently introduced an optimization…

Data Structures and Algorithms · Computer Science 2019-12-17 Sara Ahmadian , Vaggos Chatziafratis , Alessandro Epasto , Euiwoong Lee , Mohammad Mahdian , Konstantin Makarychev , Grigory Yaroslavtsev

We revisit two well-studied problems, Bounded Degree Vertex Deletion and Defective Coloring, where the input is a graph $G$ and a target degree $\Delta$ and we are asked either to edit or partition the graph so that the maximum degree…

Data Structures and Algorithms · Computer Science 2024-05-07 Michael Lampis , Manolis Vasilakis

Hierarchical clustering is a fundamental task often used to discover meaningful structures in data, such as phylogenetic trees, taxonomies of concepts, subtypes of cancer, and cascades of particle decays in particle physics. Typically…

Data Structures and Algorithms · Computer Science 2020-10-23 Craig S. Greenberg , Sebastian Macaluso , Nicholas Monath , Ji-Ah Lee , Patrick Flaherty , Kyle Cranmer , Andrew McGregor , Andrew McCallum

The emergence of massive graph data sets requires fast mining algorithms. Centrality measures to identify important vertices belong to the most popular analysis methods in graph mining. A measure that is gaining attention is forest…

Data Structures and Algorithms · Computer Science 2021-01-18 Alexander van der Grinten , Eugenio Angriman , Maria Predari , Henning Meyerhenke

We study the complexity of finding an optimal hierarchical clustering of an unweighted similarity graph under the recently introduced Dasgupta objective function. We introduce a proof technique, called the normalization procedure, that…

Computational Complexity · Computer Science 2020-08-10 Svein Høgemo , Christophe Paul , Jan Arne Telle

Treemaps have been widely applied to the visualization of hierarchical data. A treemap takes a weighted tree and visualizes its leaves in a nested planar geometric shape, with sub-regions partitioned such that each sub-region has an area…

Graphics · Computer Science 2023-09-01 Mehdi Behroozi , Reyhaneh Mohammadi , Cody Dunne

When considering the number of subtrees of trees, the extremal structures which maximize this number among binary trees and trees with a given maximum degree lead to some interesting facts that correlate to other graphical indices in…

Combinatorics · Mathematics 2012-10-11 Xiu-Mei Zhang , Xiao-Dong Zhang , Daniel Gray , Hua Wang

Motivated by applications in community detection and dense subgraph discovery, we consider new clustering objectives in hypergraphs and bipartite graphs. These objectives are parameterized by one or more resolution parameters in order to…

Data Structures and Algorithms · Computer Science 2020-06-22 Nate Veldt , Anthony Wirth , David F. Gleich
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