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Although many computational methods for rare event sampling exist, this type of calculation is not usually practical for general nonequilibrium conditions, with macroscopically irreversible dynamics and away from both stationary and…

Mesoscale and Nanoscale Physics · Physics 2015-05-18 Joshua T. Berryman , Tanja Schilling

A five-species predator-prey model is studied on a square lattice where each species has two prey and two predators on the analogy to the Rock-Paper-Scissors-Lizard-Spock game. The evolution of the spatial distribution of species is…

Populations and Evolution · Quantitative Biology 2013-08-19 Jeromos Vukov , Attila Szolnoki , György Szabó

We study two types of stochastic processes, a mean-field spatial system of interacting Fisher-Wright diffusions with an inferior and an advantageous type with rare mutation (inferior to advantageous) and a (mean-field) spatial system of…

Probability · Mathematics 2010-08-02 Donald A. Dawson , Andreas Greven

This paper deals with extinction of an isolated population caused by intrinsic noise. We model the population dynamics in a "refuge" as a Markov process which involves births and deaths on discrete lattice sites and random migrations…

Statistical Mechanics · Physics 2015-05-19 Baruch Meerson , Pavel V. Sasorov

We develop a stochastic human-rodent compartment model for Mpox transmission that combines diffusion noise with Hawkes self-exciting jumps in the human infection dynamics. Including Hawkes processes allows, for instance, to model the short…

Dynamical Systems · Mathematics 2026-01-29 Giulia Di Nunno , Nicola Giordano , Barbara Martinucci , Olena Tymoshenko

Finite-size fluctuations in coevolutionary dynamics arise in models of biological as well as of social and economic systems. This brief tutorial review surveys a systematic approach starting from a stochastic process discrete both in time…

Populations and Evolution · Quantitative Biology 2019-07-15 Jens Christian Claussen

The cross-entropy method (CE) developed by R. Rubinstein is an elegant practical principle for simulating rare events. The method approximates the probability of the rare event by means of a family of probabilistic models. The method has…

Optimization and Control · Mathematics 2007-06-13 Frederic Dambreville

According to the competitive exclusion principle, in a finite ecosystem, extinction occurs naturally when two or more species compete for the same resources. An important question that arises is: when coexistence is not possible, which…

Populations and Evolution · Quantitative Biology 2017-08-16 Marcelo Martins de Oliveira , Ronald Dickman

We describe a simple model of evolution which incorporates the branching and extinction of species lines, and also includes abiotic influences. A first principles approach is taken in which the probability for speciation and extinction are…

adap-org · Physics 2008-02-03 D. A. Head , G. J. Rodgers

We present a model for evolution and extinction in large ecosystems. The model incorporates the effects of interactions between species and the influences of abiotic environmental factors. We study the properties of the model by approximate…

adap-org · Physics 2008-02-03 Bruce W. Roberts , M. E. J. Newman

We investigate the statistics of selected rare events in a (1+1)-dimensional (classical) stochastic growth model which describes the evolution of (quantum) random unitary circuits. In such classical formulation, particles are created and/or…

Statistical Mechanics · Physics 2021-09-22 S. L. A. de Queiroz

We use interacting particle systems to investigate survival and extinction of a species with colonies located on each site of $\mathbb {Z}^d$. In each of the four models studied, an individual in a local population can reproduce, die or…

Probability · Mathematics 2012-05-15 Davide Borrello

We present a stochastic version of the Cucker-Smale flocking dynamics based on a markovian $N$-particle system of pair interactions with unbounded and, in general, non-Lipschitz continuous interaction potential. We establish the infinite…

Probability · Mathematics 2022-03-17 Martin Friesen , Oleksandr Kutoviy

In this paper, I model and study the process of natural selection between all possible mixed strategies in classical two-player two-strategy games. I derive and solve an equation that is a natural generalization of the Taylor-Jonker…

Populations and Evolution · Quantitative Biology 2018-02-21 Georgy Karev

In the present study, we have modified the traditional May-Holling-Tanner predator-prey model used to represent the interaction between least weasel and field-vole population by adding an Allee effect (strong and weak) on the field-vole…

Dynamical Systems · Mathematics 2020-10-23 Claudio Arancibia-Ibarra , Jose Flores

We consider stochastic population processes that are almost surely absorbed at the origin within finite time. Our interest is in the quasistationary distribution, $\boldsymbol{u}$, and the expected time, $\tau$, from quasistationarity to…

Probability · Mathematics 2024-12-11 Damian Clancy

Coevolving and competing species or game-theoretic strategies exhibit rich and complex dynamics for which a general theoretical framework based on finite populations is still lacking. Recently, an explicit mean-field description in the form…

Statistical Mechanics · Physics 2007-05-23 Arne Traulsen , Jens Christian Claussen , Christoph Hauert

A demographic Allee effect occurs when individual fitness, at low densities, increases with population density. Coupled with environmental fluctuations in demographic rates, Allee effects can have subtle effects on population persistence…

Probability · Mathematics 2014-05-08 Gregory Roth , Sebastian Schreiber

The question of whether a population will persist or go extinct is of key interest throughout ecology and biology. Various mathematical techniques allow us to generate knowledge regarding individual behaviour, which can be analysed to…

Populations and Evolution · Quantitative Biology 2021-04-28 Stuart T. Johnston , Matthew J. Simpson , Edmund J. Crampin

We investigate the formation of stable ecological networks where many species share the same resource. We show that such stable ecosystem naturally occurs as a result of extinctions. We obtain an analytical relation for the number of…

Populations and Evolution · Quantitative Biology 2017-04-05 V. Kozlov , S. Vakulenko , U. Wennergren
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