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In contrast to deep reinforcement learning agents, biological neural networks are grown through a self-organized developmental process. Here we propose a new hypernetwork approach to grow artificial neural networks based on neural cellular…

Neural and Evolutionary Computing · Computer Science 2022-04-26 Elias Najarro , Shyam Sudhakaran , Claire Glanois , Sebastian Risi

This contribution belongs to a combinatorial approach to hyperbolic geometry and it is aimed at possible applications to computer simulations. It is based on the splitting method which was introduced by the author and which is reminded in…

Computational Geometry · Computer Science 2011-11-09 Maurice Margenstern

The machine-part cell formation problem consists of creating machine cells and their corresponding part families with the objective of minimizing the inter-cell and intra-cell movement while maximizing the machine utilization. This article…

Computational Engineering, Finance, and Science · Computer Science 2012-12-24 Tamal Ghosh , Pranab K Dan

To determine crystal structures from an X-ray diffraction (XRD) pattern containing multiple unknown phases, a data-assimilated crystal growth (DACG) simulation method has been developed. The XRD penalty function selectively stabilizes the…

Materials Science · Physics 2024-05-17 Yuuki Kubo , Ryuhei Sato , Yuansheng Zhao , Takahiro Ishikawa , Shinji Tsuneyuki

Organic molecular crystals are appealing for next-generation optoelectronic applications, most notably due to their multiexciton generation process that can increase the efficiency of photovoltaic devices. However, a general understanding…

Materials Science · Physics 2021-11-01 Aaron R. Altman , Sivan Refaely-Abramson , Felipe H. da Jornada

Motivation: Innovative microfluidic systems carry the promise to greatly facilitate spatio-temporal analysis of single cells under well-defined environmental conditions, allowing novel insights into population heterogeneity and opening new…

Machine Learning · Computer Science 2021-05-18 Dominik Stallmann , Jan P. Göpfert , Julian Schmitz , Alexander Grünberger , Barbara Hammer

Models of areas of physics in terms of cellular automata have become increasingly popular. Cellular automata (CAs) support the modeling of systems with discrete state component values and enforce the comprehensive specification of the…

Quantum Physics · Physics 2015-08-25 Hans H. Diel

Dendritic computation endows biological neurons with rich nonlinear integration and high representational capacity, yet it is largely missing in existing deep spiking neural networks (SNNs). Although detailed multi-compartment models can…

Neural and Evolutionary Computing · Computer Science 2025-12-23 Yifan Huang , Wei Fang , Zhengyu Ma , Guoqi Li , Yonghong Tian

Anomaly detection is critical for the secure and reliable operation of industrial control systems. As our reliance on such complex cyber-physical systems grows, it becomes paramount to have automated methods for detecting anomalies,…

Machine Learning · Computer Science 2024-05-10 Mayra Macas , Chunming Wu , Walter Fuertes

The stochastic discrete space-time model of an immune response on tumor spreading in a two-dimensional square lattice has been developed. The immunity-tumor interactions are described at the cellular level and then transferred into the…

comp-gas · Physics 2007-05-23 Margarita Voitikova

New computational tools for solid-state synthesis recipe design are needed in order to accelerate the experimental realization of novel functional materials proposed by high-throughput materials discovery workflows. This work contributes a…

Materials Science · Physics 2024-07-30 Max C. Gallant , Matthew J. McDermott , Bryant Li , Kristin A. Persson

This study presents a unitary quantum cellular automaton (QCA) that, in the continuum limit, converges to the (1+1)-dimensional Generalized Dirac Equation (GDE). We outline the construction of the unitary, discrete-time evolution and derive…

Quantum Physics · Physics 2025-10-03 Xingyou Song

This paper deals with the cellular biological network analysis of the tumor-growth model, consisting of multiple spaces and time scales. In this paper, we present a model in graph simulation using ABM for tumor growth. In particular, we…

Multiagent Systems · Computer Science 2019-09-05 Ghazal Tashakor , Remo Suppi

Biological systems exhibit remarkable morphogenetic plasticity, where a single genome can encode various specialized cellular structures triggered by local chemical signals. In the domain of Deep Learning, Differentiable Neural Cellular…

Neural and Evolutionary Computing · Computer Science 2025-12-10 Ali Sakour

The advantage of Cellular Potts Model (CPM) is due to its ability for introducing cell-cell interaction based on the well known statistical model i.e. the Potts model. On the other hand, Lattice gas Cellular Automata (LGCA) can simulate…

Cellular Automata and Lattice Gases · Physics 2007-05-23 Mehrdad Ghaemi , Amene Shahrokhi

We present feature finding and tracking algorithms in 3D in living cells, and demonstrate their utility to measure metrics important in cell biological processes. We developed a computational imaging hybrid approach that combines automated…

Biological Physics · Physics 2015-04-06 Kemp Plumb , Sarah Elaz , Vincent Pelletier , Maria L. Kilfoil

In studying the predictability of emergent phenomena in complex systems, Israeli & Goldenfeld (Phys. Rev. Lett., 2004; Phys. Rev. E, 2006) showed how to coarse-grain (elementary) cellular automata (CA). Their algorithm for finding…

Cellular Automata and Lattice Gases · Physics 2020-12-23 Yerim Song , Joshua A. Grochow

Ab initio simulations are capable of providing detailed information of material behavior at the nanoscale. Simulating experimentally relevant situations is, however, often computationally intense. Using hybrid approaches between ab initio…

Computational Physics · Physics 2019-03-26 Michael Sluydts , Michiel Larmuseau , Johan Lauwaert , Stefaan Cottenier

Emergent processes in complex systems such as cellular automata can perform computations of increasing complexity, and could possibly lead to artificial evolution. Such a feat would require scaling up current simulation sizes to allow for…

Cellular Automata and Lattice Gases · Physics 2021-04-05 Hugo Cisneros , Josef Sivic , Tomas Mikolov

The necessity of abundant annotated data and complex network architectures presents a significant challenge in deep-learning Salient Object Detection (deep SOD) and across the broader deep-learning landscape. This challenge is particularly…

Computer Vision and Pattern Recognition · Computer Science 2025-04-16 Felipe Crispim Salvagnini , Jancarlo F. Gomes , Cid A. N. Santos , Silvio Jamil F. Guimarães , Alexandre X. Falcão
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