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Advances in technology and computing hardware are enabling scientists from all areas of science to produce massive amounts of data using large-scale simulations or observational facilities. In this era of data deluge, effective coordination…

Databases · Computer Science 2015-03-31 Spyros Blanas , Surendra Byna

Traditional science searched for new objects and phenomena that led to discoveries. Tomorrow's science will combine together the large pool of information in scientific archives and make discoveries. Scienthists are currently keen to…

Databases · Computer Science 2007-05-23 Tanu Malik , Alex S. Szalay , Tamas Budavari , Ani R. Thakar

The reuse of research software is central to research efficiency and academic exchange. The application of software enables researchers with varied backgrounds to reproduce, validate, and expand upon study findings. Furthermore, the…

We view Digital Ecosystems to be the digital counterparts of biological ecosystems, exploiting the self-organising properties of biological ecosystems, which are considered to be robust, self-organising and scalable architectures that can…

Neural and Evolutionary Computing · Computer Science 2009-10-05 G. Briscoe , P. De Wilde

Modern tools for biological research, especially microscopy, have rapidly advanced in recent years, which has led to the generation of increasingly large amounts of data on a regular basis. The result is that scientists desperately need…

Other Quantitative Biology · Quantitative Biology 2021-08-18 Andrey Andreev , Tom Morrell , Kristin Briney , Sandra Gesing , Uri Manor

In the AI-for-science era, scientific computing scenarios such as concurrent learning and high-throughput computing demand a new generation of infrastructure that supports scalable computing resources and automated workflow management on…

Scientific workflows are a cornerstone of modern scientific computing. They are used to describe complex computational applications that require efficient and robust management of large volumes of data, which are typically stored/processed…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-01 Tainã Coleman , Henri Casanova , Loïc Pottier , Manav Kaushik , Ewa Deelman , Rafael Ferreira da Silva

Leadership computing facilities around the world support cutting-edge scientific research across a broad spectrum of disciplines including understanding climate change, combating opioid addiction, or simulating the decay of a neutron. While…

High Energy Physics - Lattice · Physics 2020-04-16 Chia Cheng Chang , Christopher Körber , André Walker-Loud

Computational science is changing to be data intensive. Super-Computers must be balanced systems; not just CPU farms but also petascale IO and networking arrays. Anyone building CyberInfrastructure should allocate resources to support a…

Databases · Computer Science 2007-05-23 Gordon Bell , Jim Gray , Alex Szalay

Data intensive applications often involve the analysis of large datasets that require large amounts of compute and storage resources. While dedicated compute and/or storage farms offer good task/data throughput, they suffer low resource…

Distributed, Parallel, and Cluster Computing · Computer Science 2008-08-27 Ioan Raicu , Yong Zhao , Ian Foster , Alex Szalay

We have evolved an IT system that is ubiquitous and pervasive and integrated into most aspects of our lives. Many of us are working on 4th and 5th level refinements in efficiency and functionality. But, we stand on the shoulders of those…

Other Computer Science · Computer Science 2013-11-15 William R Simpson

Objective: To (1) demonstrate the implementation of a data science platform built on open-source technology within a large, academic healthcare system and (2) describe two computational healthcare applications built on such a platform.…

The term Data Space, understood as the secure exchange of data in distributed systems, ensuring openness, transparency, decentralization, sovereignty, and interoperability of information, has gained importance during the last years.…

Databases · Computer Science 2024-02-13 Javier Conde , Alejandro Pozo , Andrés Munoz-Arcentales , Johnny Choque , Álvaro Alonso

Modern scientific data mainly consist of huge datasets gathered by a very large number of techniques and stored in very diversified and often incompatible data repositories. More in general, in the e-science environment, it is considered as…

Instrumentation and Methods for Astrophysics · Physics 2010-10-20 M. Brescia , G. Longo , F. Pasian

Astrophysics lies at the crossroads of big datasets (such as the Large Synoptic Survey Telescope and Gaia), open source software to visualize and interpret high dimensional datasets (such as Glue, WorldWide Telescope, and OpenSpace), and…

We make a case for "planetary computing" -- infrastructure to handle the ingestion, transformation, analysis and publication of global data products for furthering environmental science and enabling better informed policy-making. We draw on…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-04 Patrick Ferris , Michael Dales , Sadiq Jaffer , Amelia Holcomb , Eleanor Toye Scott , Thomas Swinfield , Alison Eyres , Andrew Balmford , David Coomes , Srinivasan Keshav , Anil Madhavapeddy

The increasingly collaborative, globalized nature of scientific research combined with the need to share data and the explosion in data volumes present an urgent need for a scientific data management system (SDMS). An SDMS presents a…

Databases · Computer Science 2020-04-09 Dale Stansberry , Suhas Somnath , Jessica Breet , Gregory Shutt , Mallikarjun Shankar

Cloud computing providers have setup several data centers at different geographical locations over the Internet in order to optimally serve needs of their customers around the world. However, existing systems do not support mechanisms and…

Distributed, Parallel, and Cluster Computing · Computer Science 2010-03-23 Rajkumar Buyya , Rajiv Ranjan , Rodrigo N. Calheiros

Progress in many domains increasingly benefits from our ability to view the systems through a computational lens, i.e., using computational abstractions of the domains; and our ability to acquire, share, integrate, and analyze disparate…

The term scientific workflow has evolved over the last two decades to encompass a broad range of compositions of interdependent compute tasks and data movements. It has also become an umbrella term for processing in modern scientific…