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Probabilistic programming frameworks are powerful tools for statistical modelling and inference. They are not immediately generalisable to phylogenetic problems due to the particular computational properties of the phylogenetic tree object.…

Populations and Evolution · Quantitative Biology 2022-11-11 Christiaan Swanepoel , Mathieu Fourment , Xiang Ji , Hassan Nasif , Marc A Suchard , Frederick A Matsen , Alexei Drummond

Within the domain of medical image analysis, three distinct methodologies have demonstrated commendable accuracy: Neural Networks, Decision Trees, and Ensemble-Based Learning Algorithms, particularly in the specialized context of genstro…

Computer Vision and Pattern Recognition · Computer Science 2025-10-14 Zeshan Khan

In this paper, we consider the problem of distributed inference in tree based networks. In the framework considered in this paper, distributed nodes make a 1-bit local decision regarding a phenomenon before sending it to the fusion center…

Information Theory · Computer Science 2016-11-17 Bhavya Kailkhura , Aditya Vempaty , Pramod K. Varshney

We present a new numerical scheme to solve the transfer of diffuse radiation on three-dimensional mesh grids which is efficient on processors with highly parallel architecture such as recently popular GPUs and CPUs with multi- and many-core…

Instrumentation and Methods for Astrophysics · Physics 2015-05-27 Satoshi Tanaka , Kohji Yoshikawa , Takashi Okamoto , Kenji Hasegawa

This work presents an efficient numerical method based on spectral expansions for simulation of heat and moisture diffusive transfers through multilayered porous materials. Traditionally, by using the finite-difference approach, the problem…

Computational Engineering, Finance, and Science · Computer Science 2020-02-20 Suelen Gasparin , Denys Dutykh , Nathan Mendes

We have developed a three-dimensional radiative transfer method designed specifically for use with parallel adaptive mesh refinement hydrodynamics codes. This new algorithm, which we call hybrid characteristics, introduces a novel form of…

Astrophysics · Physics 2009-11-11 Erik-Jan Rijkhorst , Tomasz Plewa , Anshu Dubey , Garrelt Mellema

Radiative transfer plays a key role in the star formation process. Due to a high computational cost, radiation-hydrodynamics simulations performed up to now have mainly been carried out in the grey approximation. In recent years,…

Instrumentation and Methods for Astrophysics · Physics 2015-05-27 Matthias González , Neil Vaytet , Benoît Commerçon , Jacques Masson

Inverse problems arise in a multitude of applications, where the goal is to recover a clean signal from noisy and possibly (non)linear observations. The difficulty of a reconstruction problem depends on multiple factors, such as the ground…

Image and Video Processing · Electrical Eng. & Systems 2024-08-21 Zalan Fabian , Berk Tinaz , Mahdi Soltanolkotabi

We introduce the radiative transfer postprocessing code Subsweep. The code is based on the method of transport sweeps, in which the exact solution to the scattering-less radiative transfer equation is computed in a single pass through the…

Instrumentation and Methods for Astrophysics · Physics 2024-12-03 Toni Peter , Joseph S. W. Lewis , Ralf S. Klessen , Simon C. O. Glover , Guido Kanschat

Various modifications of decision trees have been extensively used during the past years due to their high efficiency and interpretability. Tree node splitting based on relevant feature selection is a key step of decision tree learning, at…

Machine Learning · Computer Science 2017-09-05 Dmitry Ignatov , Andrey Ignatov

We present a new three-dimensional radiative transfer (RT) code, RADAMESH, based on a ray-tracing, photon-conserving and adaptive (in space and time) scheme. RADAMESH uses a novel Monte Carlo approach to sample the radiation field within…

Cosmology and Nongalactic Astrophysics · Physics 2015-05-19 Sebastiano Cantalupo , Cristiano Porciani

Planning with pretrained diffusion models has emerged as a promising approach for solving test-time guided control problems. Standard gradient guidance typically performs optimally under convex, differentiable reward landscapes. However, it…

Artificial Intelligence · Computer Science 2025-11-11 Hyeonseong Jeon , Cheolhong Min , Jaesik Park

We present DART-Ray, a new ray-tracing 3D dust radiative transfer (RT) code designed specifically to calculate radiation field energy density (RFED) distributions within dusty galaxy models with arbitrary geometries. In this paper we…

Instrumentation and Methods for Astrophysics · Physics 2015-06-18 G. Natale , C. C. Popescu , R. J. Tuffs , D. Semionov

Probabilistic modeling over the combinatorially large space of tree topologies remains a central challenge in phylogenetic inference. Previous approaches often necessitate pre-sampled tree topologies, limiting their modeling capability to a…

Populations and Evolution · Quantitative Biology 2025-07-25 Tianyu Xie , Yicong Mao , Cheng Zhang

This paper presents the development and evaluation of WiThRay, a new wireless three-dimensional ray-tracing (RT) simulator. RT-based simulators are widely used for generating realistic channel data by combining RT methodology to get signal…

Information Theory · Computer Science 2023-04-25 Hyuckjin Choi , Jaehoon Chung , Jaeky Oh , George C. Alexandropoulos , Junil Choi

Achieving the desired optical response from a multilayer thin-film structure over a broad range of wavelengths and angles of incidence can be challenging. An advanced thin-film structure can consist of multiple materials with different…

Computational Physics · Physics 2022-05-25 Alexander Luce , Ali Mahdavi , Florian Marquardt , Heribert Wankerl

Automatic tree density estimation and counting using single aerial and satellite images is a challenging task in photogrammetry and remote sensing, yet has an important role in forest management. In this paper, we propose the first…

Computer Vision and Pattern Recognition · Computer Science 2023-08-09 Hamed Amini Amirkolaee , Miaojing Shi , Mark Mulligan

Diffusion-based and iterative methods have become effective tools for solving imaging inverse problems. Their reconstruction process naturally forms a trajectory of intermediate estimates. Although these intermediate estimates define a…

Computer Vision and Pattern Recognition · Computer Science 2026-05-29 Chaoyan Huang , Haijie Yuan , Saiprasad Ravishankar

We present a novel Lyman alpha (Ly$\alpha$) radiative transfer code, SEURAT, where line scatterings are solved adaptively with the resolution of the smoothed particle hydrodynamics (SPH). The radiative transfer method implemented in SEURAT…

Instrumentation and Methods for Astrophysics · Physics 2018-01-30 Makito Abe , Hiroyuki Suzuki , Kenji Hasegawa , Benoit Semelin , Hidenobu Yajima , Masayuki Umemura

We propose novel model transfer-learning methods that refine a decision forest model M learned within a "source" domain using a training set sampled from a "target" domain, assumed to be a variation of the source. We present two random…

Machine Learning · Computer Science 2018-05-01 Noam Segev , Maayan Harel , Shie Mannor , Koby Crammer , Ran El-Yaniv