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Probabilistic models based on continuous latent spaces, such as variational autoencoders, can be understood as uncountable mixture models where components depend continuously on the latent code. They have proven to be expressive tools for…

Machine Learning · Computer Science 2024-06-27 Alvaro H. C. Correia , Gennaro Gala , Erik Quaeghebeur , Cassio de Campos , Robert Peharz

Time-delay embedding is a fundamental technique in Topological Data Analysis (TDA) for reconstructing the phase space dynamics of time-series data. Persistent homology effectively identifies global topological features, such as loops…

Statistics Theory · Mathematics 2026-04-21 Donghyun Park , Junhyun An , Taehyoung Kim , Jisu Kim

Persistent homology (PH) is a rigorous mathematical theory that provides a robust descriptor of data in the form of persistence diagrams (PDs) which are 2D multisets of points. Their variable size makes them, however, difficult to combine…

Machine Learning · Statistics 2019-06-14 Bartosz Zielinski , Michal Lipinski , Mateusz Juda , Matthias Zeppelzauer , Pawel Dlotko

Circuits are fundamental objects in linear programming and oriented matroid theory, representing the elementary difference vectors of a polyhedron between points in its affine space. A recent concept introduced by Ekbatani, Natura, and…

Optimization and Control · Mathematics 2025-12-08 Steffen Borgwardt , Nicholas Crawford , Sean Kafer , Jon Lee , Angela Morrison

Cyclic reduction is a method for the solution of (block-)tridiagonal linear systems. In this note we review the method tailored to hermitian positive definite banded linear systems. The reviewed method has the following advantages: It is…

Numerical Analysis · Mathematics 2018-07-03 Martin Neuenhofen

Probabilistic circuits (PCs) are powerful probabilistic models that enable exact and tractable inference, making them highly suitable for probabilistic reasoning and inference tasks. While dominant in neural networks, representation…

Machine Learning · Computer Science 2025-07-29 Steven Braun , Sahil Sidheekh , Antonio Vergari , Martin Mundt , Sriraam Natarajan , Kristian Kersting

Interacting, self-propelled particles such as epithelial cells can dynamically self-organize into complex multicellular patterns, which are challenging to classify without a priori information. Classically, different phases and phase…

Quantitative Methods · Quantitative Biology 2021-01-19 Dhananjay Bhaskar , William Y. Zhang , Ian Y. Wong

Dynamic programming on tree decompositions is a frequently used approach to solve otherwise intractable problems on instances of small treewidth. In recent work by Bodlaender et al., it was shown that for many connectivity problems, there…

Data Structures and Algorithms · Computer Science 2013-06-03 Stefan Fafianie , Hans L. Bodlaender , Jesper Nederlof

The extension of persistent homology to multi-parameter setups is an algorithmic challenge. Since most computation tasks scale badly with the size of the input complex, an important pre-processing step consists of simplifying the input…

Algebraic Topology · Mathematics 2019-03-19 Ulderico Fugacci , Michael Kerber

In traditional topology optimization, the computing time required to iteratively update the material distribution within a design domain strongly depends on the complexity or size of the problem, limiting its application in real engineering…

Computational Engineering, Finance, and Science · Computer Science 2024-05-14 Gabriel Garayalde , Matteo Torzoni , Matteo Bruggi , Alberto Corigliano

Probabilistic Circuits (PCs) are a class of generative models that allow exact and tractable inference for a wide range of queries. While recent developments have enabled the learning of deep and expressive PCs, this increased capacity can…

Machine Learning · Computer Science 2025-08-08 Hrithik Suresh , Sahil Sidheekh , Vishnu Shreeram M. P , Sriraam Natarajan , Narayanan C. Krishnan

We construct worst-case examples for the standard reduction algorithm for computing persistent homology. Our constructions are similar to the worst-case examples introduced by Morozov, but we replace the single-triangle arrangement with a…

Algebraic Topology · Mathematics 2026-03-18 Uzay Çetin , Ergun Yalcin

We present a parallelizable algorithm for computing the persistent homology of a filtered chain complex. Our approach differs from the commonly used reduction algorithm by first computing persistence pairs within local chunks, then…

Algebraic Topology · Mathematics 2013-03-05 Ulrich Bauer , Michael Kerber , Jan Reininghaus

To account for volatile renewable energy supply, energy systems optimization problems require high temporal resolution. Many models use time-series clustering to find representative periods to reduce the amount of time-series input data and…

Data quality is crucial for the successful training, generalization and performance of machine learning models. We propose to measure the quality of a subset concerning the dataset it represents, using topological data analysis techniques.…

Algebraic Topology · Mathematics 2024-10-01 Álvaro Torras-Casas , Eduardo Paluzo-Hidalgo , Rocio Gonzalez-Diaz

The main purpose of this paper is providing a simple method to generate the matrices of irreducible representations because it is useful to reduce the computational time of solving the eigenvalue problems. The only information we need to…

Mathematical Physics · Physics 2007-08-07 Young-Chung Hsue

Topological data analysis can extract effective information from higher-dimensional data. Its mathematical basis is persistent homology. The persistent homology can calculate topological features at different spatiotemporal scales of the…

Algebraic Topology · Mathematics 2023-09-29 Dinghua Shi , Zhifeng Chen , Chuang Ma , Guanrong Chen

Linear solvers are major computational bottlenecks in a wide range of decision support and optimization computations. The challenges become even more pronounced on heterogeneous hardware, where traditional sparse numerical linear algebra…

Computational Engineering, Finance, and Science · Computer Science 2024-01-26 Kasia Świrydowicz , Nicholson Koukpaizan , Maksudul Alam , Shaked Regev , Michael Saunders , Slaven Peleš

Identifying and comparing topological features, particularly cycles, across different topological objects remains a fundamental challenge in persistent homology and topological data analysis. This work introduces a novel framework for…

Quantitative Methods · Quantitative Biology 2025-12-16 Sixtus Dakurah

We consider linear problems in the worst case setting. That is, given a linear operator and a pool of admissible linear measurements, we want to approximate the values of the operator uniformly on a convex and balanced set by means of…

Numerical Analysis · Mathematics 2024-03-05 David Krieg , Peter Kritzer
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