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Rooted phylogenetic networks, or more generally, directed acyclic graphs (DAGs), are widely used to model species or gene relationships that traditional rooted trees cannot fully capture, especially in the presence of reticulate processes…

Populations and Evolution · Quantitative Biology 2025-01-24 Anna Lindeberg , Marc Hellmuth

Different directed acyclic graphs (DAGs) may be Markov equivalent in the sense that they entail the same conditional independence relations among the observed variables. Chickering (1995) provided a transformational characterization of…

Artificial Intelligence · Computer Science 2012-07-09 Jiji Zhang , Peter L. Spirtes

We extend the theory of d-separation to cases in which data instances are not independent and identically distributed. We show that applying the rules of d-separation directly to the structure of probabilistic models of relational data…

Artificial Intelligence · Computer Science 2014-01-07 Marc Maier , Katerina Marazopoulou , David Jensen

We define joint exchangeability on arrays indexed by a vector of natural numbers with coordinates being the vertices of directed acyclic graphs (DAGs) using local isomorphisms. The notion provides a new version of exchangeability, which is…

Probability · Mathematics 2021-04-23 Jiho Lee

Semantic parses are directed acyclic graphs (DAGs), so semantic parsing should be modeled as graph prediction. But predicting graphs presents difficult technical challenges, so it is simpler and more common to predict the linearized graphs…

Computation and Language · Computer Science 2019-10-22 Federico Fancellu , Sorcha Gilroy , Adam Lopez , Mirella Lapata

Recursive linear structural equation models and the associated directed acyclic graphs (DAGs) play an important role in causal discovery. The classic identifiability result for this class of models states that when only observational data…

Statistics Theory · Mathematics 2023-08-21 Jun Wu , Mathias Drton

It is well known that there may be many causal explanations that are consistent with a given set of data. Recent work has been done to represent the common aspects of these explanations into one representation. In this paper, we address…

Methodology · Statistics 2012-07-09 Ayesha R. Ali , Thomas S. Richardson , Peter L. Spirtes , Jiji Zhang

Diffusion models have established themselves as state-of-the-art generative models across various data modalities, including images and videos, due to their ability to accurately approximate complex data distributions. Unlike traditional…

Machine Learning · Computer Science 2025-10-23 Daniel Wesego

Acyclic model, often depicted as a directed acyclic graph (DAG), has been widely employed to represent directional causal relations among collected nodes. In this article, we propose an efficient method to learn linear non-Gaussian DAG in…

Machine Learning · Statistics 2021-11-02 Ruixuan Zhao , Xin He , Junhui Wang

We present in this article the model Function-described graph (FDG), which is a type of compact representation of a set of attributed graphs (AGs) that borrow from Random Graphs the capability of probabilistic modelling of structural and…

Artificial Intelligence · Computer Science 2016-05-11 Francesc Serratosa

Covariate adjustment is a widely used approach to estimate total causal effects from observational data. Several graphical criteria have been developed in recent years to identify valid covariates for adjustment from graphical causal…

Statistics Theory · Mathematics 2015-07-07 Emilija Perković , Johannes Textor , Markus Kalisch , Marloes H. Maathuis

Signed graphs are complex systems that represent trust relationships or preferences in various domains. Learning node representations in such graphs is crucial for many mining tasks. Although real-world signed relationships can be…

Machine Learning · Computer Science 2023-07-07 Geonwoo Ko , Jinhong Jung

One of the fundamental challenges to scale self-driving is being able to create accurate high definition maps (HD maps) with low cost. Current attempts to automate this process typically focus on simple scenarios, estimate independent maps…

Computer Vision and Pattern Recognition · Computer Science 2020-12-24 Namdar Homayounfar , Wei-Chiu Ma , Justin Liang , Xinyu Wu , Jack Fan , Raquel Urtasun

A Bayesian Network is a directed acyclic graph (DAG) on a set of $n$ random variables (the vertices); a Bayesian Network Distribution (BND) is a probability distribution on the random variables that is Markovian on the graph. A finite…

Machine Learning · Computer Science 2023-06-01 Spencer L. Gordon , Bijan Mazaheri , Yuval Rabani , Leonard J. Schulman

A new class of graphical models capturing the dependence structure of events that occur in time is proposed. The graphs represent so-called local independences, meaning that the intensities of certain types of events are independent of some…

Statistics Theory · Mathematics 2013-07-11 Vanessa Didelez

Estimating the structure of directed acyclic graphs (DAGs) of features (variables) plays a vital role in revealing the latent data generation process and providing causal insights in various applications. Although there have been many…

Machine Learning · Computer Science 2024-03-06 Shaohua Fan , Shuyang Zhang , Xiao Wang , Chuan Shi

Hidden variable graphical models can sometimes imply constraints on the observable distribution that are more complex than simple conditional independence relations. These observable constraints can falsify assumptions of the model that…

Methodology · Statistics 2026-05-12 Michael C. Sachs , Erin E. Gabriel , Robin J. Evans , Arvid Sjölander

A graphical model is a statistical model that is associated to a graph whose nodes correspond to variables of interest. The edges of the graph reflect allowed conditional dependencies among the variables. Graphical models admit…

Methodology · Statistics 2016-06-09 Mathias Drton , Marloes H. Maathuis

Directed Acyclic Graphs (DAGs) are widely used to represent structured knowledge in scientific and technical domains. However, datasets for real-world DAGs remain scarce because constructing them typically requires expert interpretation of…

Artificial Intelligence · Computer Science 2026-03-27 Shu Wan , Saketh Vishnubhatla , Iskander Kushbay , Tom Heffernan , Aaron Belikoff , Raha Moraffah , Huan Liu

Deep Generative Models (DGMs) are versatile tools for learning data representations while adequately incorporating domain knowledge such as the specification of conditional probability distributions. Recently proposed DGMs tackle the…

Machine Learning · Computer Science 2024-01-30 Romain Lopez , Jan-Christian Huetter , Ehsan Hajiramezanali , Jonathan Pritchard , Aviv Regev
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