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Dual-tree algorithms are a widely used class of branch-and-bound algorithms. Unfortunately, developing dual-tree algorithms for use with different trees and problems is often complex and burdensome. We introduce a four-part logical split:…

Data Structures and Algorithms · Computer Science 2013-04-17 Ryan R. Curtin , William B. March , Parikshit Ram , David V. Anderson , Alexander G. Gray , Charles L. Isbell

We determine the maximum distance between any two of the center, centroid, and subtree core among trees with a given order. Corresponding results are obtained for trees with given maximum degree and also for trees with given diameter. The…

Combinatorics · Mathematics 2017-01-20 Heather Smith , László Székely , Hua Wang , Shuai Yuan

The overlap graphs of subtrees in a tree (SOGs) generalise many other graphs classes with set representation characterisations. The complexity of recognising SOGs in open. The complexities of recognising many subclasses of SOGs are known.…

Computational Complexity · Computer Science 2022-02-04 Jessica Enright , Martin Pergel

We study a family of tree-type diagrams that arise in studies of the cumulant expansion in discrete Erd\H os-R\'enyi random matrix models. Using a version of the Pr\" ufer code, we obtain an explicit expression for the number of tree-type…

Combinatorics · Mathematics 2024-12-16 O. Khorunzhiy

We consider the counting problem of the number of \textit{leaf-labeled increasing trees}, where internal nodes may have an arbitrary number of descendants. The set of all such trees is a discrete representation of the genealogies obtained…

Populations and Evolution · Quantitative Biology 2022-11-08 Johannes Wirtz

Phylogenetic trees are a central tool in understanding evolution. They are typically inferred from sequence data, and capture evolutionary relationships through time. It is essential to be able to compare trees from different data sources…

Populations and Evolution · Quantitative Biology 2017-10-31 Michelle Kendall , Caroline Colijn

Given a solution to a recursive distributional equation, a natural (and non-trivial) question is whether the corresponding recursive tree process is endogenous. That is, whether the random environment almost surely defines the tree process.…

Probability · Mathematics 2016-10-25 Victor Kleptsyn , Michele Triestino

Due to their long-standing reputation as excellent off-the-shelf predictors, random forests continue remain a go-to model of choice for applied statisticians and data scientists. Despite their widespread use, however, until recently, little…

Machine Learning · Statistics 2021-04-01 Siyu Zhou , Lucas Mentch

Understanding the evolution of a set of genes or species is a fundamental problem in evolutionary biology. The problem we study here takes as input a set of trees describing {possibly discordant} evolutionary scenarios for a given set of…

Data Structures and Algorithms · Computer Science 2019-07-10 Cedric Chauve , Mark Jones , Manuel Lafond , Céline Scornavacca , Mathias Weller

The motivation for this paper is the study of the phase transition for recurrence/transience of a class of self-interacting random walks on trees, which includes the once-reinforced random walk. For this purpose, we define a quantity, that…

Probability · Mathematics 2018-10-18 Andrea Collevecchio , Daniel Kious , Vladas Sidoravicius

A split-by-edges tree of a graph G on n vertices is a binary tree T where the root = V(G), every leaf is an independent set in G, and for every other node N in T with children L and R there is a pair of vertices {u, v} in N such that L = N…

Data Structures and Algorithms · Computer Science 2015-05-14 Asbjørn Brændeland

Reconstructing a parsimonious phylogenetic network that displays multiple phylogenetic trees is an important problem in theory of phylogenetics, where the complexity of the inferred networks is measured by reticulation numbers. The…

Populations and Evolution · Quantitative Biology 2024-08-27 Yufeng Wu , Louxin Zhang

A spanning tree $T$ in a graph $G$ is a sub-graph of $G$ with the same vertex set as $G$ which is a tree. In 1981, McKay proved an asymptotic result regarding the number of spanning trees in random $k$-regular graphs. In this paper we prove…

Combinatorics · Mathematics 2023-01-31 Ron Rosenthal , Lior Tenenbaum

We discuss a notion of convergence for binary trees that is based on subtree sizes. In analogy to recent developments in the theory of graphs, posets and permutations we investigate some general aspects of the topology, such as a…

Combinatorics · Mathematics 2024-02-14 Rudolf Grübel

We show that the transience or recurrence of a random walk in certain random environments on an arbitrary infinite locally finite tree is determined by the branching number of the tree, which is a measure of the average number of branches…

Probability · Mathematics 2007-05-23 Robin Pemantle , Russell Lyons

We consider a procedure to reduce simply generated trees by iteratively removing all leaves. In the context of this reduction, we study the number of vertices that are deleted after applying this procedure a fixed number of times by using…

Combinatorics · Mathematics 2019-11-11 Benjamin Hackl , Clemens Heuberger , Stephan Wagner

We calculate the exact number of contours of size $n$ containing a fixed vertex in $d$-ary trees and provide sharp estimates for this number for more general trees. We also obtain a characterization of the locally finite trees with…

Combinatorics · Mathematics 2016-12-21 Noga Alon , Rodrigo Bissacot , Eric Ossami Endo

We study the problem of learning a node-labeled tree given independent traces from an appropriately defined deletion channel. This problem, tree trace reconstruction, generalizes string trace reconstruction, which corresponds to the tree…

Computational Complexity · Computer Science 2020-09-22 Sami Davies , Miklos Z. Racz , Cyrus Rashtchian

Tree sets are posets with additional structure that generalize tree-like objects in graphs, matroids, or other combinatorial structures. They are a special class of abstract separation systems. We study infinite tree sets and how they…

Combinatorics · Mathematics 2025-05-16 Jay Lilian Kneip

Regression trees are a popular machine learning algorithm that fit piecewise constant models by recursively partitioning the predictor space. This paper focuses on statistical inference for a data-dependent model obtained from a fitted…

Methodology · Statistics 2025-12-17 Soham Bakshi , Yiling Huang , Snigdha Panigrahi , Walter Dempsey
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