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Resting-state functional MRI (rs-fMRI) is a rich imaging modality that captures spontaneous brain activity patterns, revealing clues about the connectomic organization of the human brain. While many rs-fMRI studies have focused on static…

Machine Learning · Computer Science 2019-08-20 Meenakshi Khosla , Keith Jamison , Amy Kuceyeski , Mert R. Sabuncu

Neuroscience theory posits that the brain's visual system coarsely identifies broad object categories via neural activation patterns, with similar objects producing similar neural responses. Artificial neural networks also have internal…

Computer Vision and Pattern Recognition · Computer Science 2018-11-28 Nathaniel Blanchard , Jeffery Kinnison , Brandon RichardWebster , Pouya Bashivan , Walter J. Scheirer

Tree-structured neural networks encode a particular tree geometry for a sentence in the network design. However, these models have at best only slightly outperformed simpler sequence-based models. We hypothesize that neural sequence models…

Computation and Language · Computer Science 2015-11-10 Samuel R. Bowman , Christopher D. Manning , Christopher Potts

Insufficiency of training data is a persistent issue in medical image analysis, especially for task-based functional magnetic resonance images (fMRI) with spatio-temporal imaging data acquired using specific cognitive tasks. In this paper,…

Image and Video Processing · Electrical Eng. & Systems 2023-08-31 Jiyao Wang , Nicha C. Dvornek , Lawrence H. Staib , James S. Duncan

The effectiveness of deep neural architectures has been widely supported in terms of both experimental and foundational principles. There is also clear evidence that the activation function (e.g. the rectifier and the LSTM units) plays a…

Machine Learning · Computer Science 2018-10-08 Giuseppe Marra , Dario Zanca , Alessandro Betti , Marco Gori

Long short-term memory recurrent neural networks (LSTM-RNNs) are considered state-of-the art in many speech processing tasks. The recurrence in the network, in principle, allows any input to be remembered for an indefinite time, a feature…

Audio and Speech Processing · Electrical Eng. & Systems 2020-09-02 Jeroen Zegers , Hugo Van hamme

Human activity recognition (HAR) has become a popular topic in research because of its wide application. With the development of deep learning, new ideas have appeared to address HAR problems. Here, a deep network architecture using…

Computer Vision and Pattern Recognition · Computer Science 2017-09-08 Yu Zhao , Rennong Yang , Guillaume Chevalier , Maoguo Gong

Functional magnetic resonance imaging (fMRI) is used to extract {\em functional networks} connecting correlated human brain sites. Analysis of the resulting networks in different tasks shows that: (a) the distribution of functional…

Disordered Systems and Neural Networks · Physics 2007-05-23 Victor M. Eguiluz , Dante R. Chialvo , Guillermo A. Cecchi , Marwan Baliki , A. Vania Apkarian

Understanding how the brain encodes external stimuli and how these stimuli can be decoded from the measured brain activities are long-standing and challenging questions in neuroscience. In this paper, we focus on reconstructing the complex…

Neurons and Cognition · Quantitative Biology 2022-10-05 Sikun Lin , Thomas Sprague , Ambuj K Singh

Typical methods for supervised sequence modeling are built upon the recurrent neural networks to capture temporal dependencies. One potential limitation of these methods is that they only model explicitly information interactions between…

Computer Vision and Pattern Recognition · Computer Science 2019-08-27 Canmiao Fu , Wenjie Pei , Qiong Cao , Chaopeng Zhang , Yong Zhao , Xiaoyong Shen , Yu-Wing Tai

Understanding the dynamic reorganization of brain networks is critical for predicting cognitive decline, neurological progression, and individual variability in clinical outcomes. This work proposes a multimodal graph neural network…

Machine Learning · Computer Science 2026-02-11 Preksha Girish , Rachana Mysore , Kiran K. N. , Hiranmayee R. , Shipra Prashanth , Shrey Kumar

A new paradigm for large-scale spectrum occupancy learning based on long short-term memory (LSTM) recurrent neural networks is proposed. Studies have shown that spectrum usage is a highly correlated time series. Moreover, there is a…

Signal Processing · Electrical Eng. & Systems 2019-05-14 Mohsen Joneidi , Ismail Alkhouri , Nazanin Rahnavard

Background: Deep neural networks have proven to be powerful computational tools for modeling, prediction, and generation. However, the workings of these models have generally been opaque. Recent work has shown that the performance of some…

Artificial Intelligence · Computer Science 2023-11-21 Andrew S. Nencka , L. Tugan Muftuler , Peter LaViolette , Kevin M. Koch

Deep neural networks trained on Functional Connectivity (FC) networks extracted from functional Magnetic Resonance Imaging (fMRI) data have gained popularity due to the increasing availability of data and advances in model architectures,…

Machine Learning · Computer Science 2023-12-05 Jungwon Choi , Seongho Keum , EungGu Yun , Byung-Hoon Kim , Juho Lee

Recurrent neural networks for language models like long short-term memory (LSTM) have been utilized as a tool for modeling and predicting long term dynamics of complex stochastic molecular systems. Recently successful examples on learning…

Artificial Intelligence · Computer Science 2021-07-15 Wenqi Zeng , Siqin Cao , Xuhui Huang , Yuan Yao

Neural network models become increasingly popular as dynamic modeling tools in the control community. They have many appealing features including nonlinear structures, being able to approximate any functions. While most researchers hold…

Machine Learning · Computer Science 2023-10-23 Jinming Zhou , Yucai Zhu

Large-scale electrophysiological recordings now allow simultaneous monitoring of thousands of neurons across multiple brain regions, revealing structured variability in neural population activity. Understanding how these collective patterns…

Neurons and Cognition · Quantitative Biology 2026-03-12 Nicolas Béreux , Giovanni Catania , Aurélien Decelle , Francesca Mignacco , Alfonso de Jesús Navas Gómez , Beatriz Seoane

Aggregating multi-subject functional magnetic resonance imaging (fMRI) data is indispensable for generating valid and general inferences from patterns distributed across human brains. The disparities in anatomical structures and functional…

Machine Learning · Computer Science 2019-11-20 Weida Li , Mingxia Liu , Fang Chen , Daoqiang Zhang

In recent years, the rapid advancement of large language models (LLMs) in natural language processing has sparked significant interest among researchers to understand their mechanisms and functional characteristics. Although prior studies…

Neurons and Cognition · Quantitative Biology 2026-01-08 Yiheng Liu , Zhengliang Liu , Zihao Wu , Junhao Ning , Haiyang Sun , Sichen Xia , Yang Yang , Xiaohui Gao , Ning Qiang , Bao Ge , Tianming Liu , Junwei Han , Xintao Hu

Traditional Long Short-Term Memory (LSTM) networks are effective for handling sequential data but have limitations such as gradient vanishing and difficulty in capturing long-term dependencies, which can impact their performance in dynamic…

Computational Engineering, Finance, and Science · Computer Science 2026-04-29 Faezeh Sarlakifar , Mohammadreza Mohammadzadeh Asl , Sajjad Rezvani Khaledi , Armin Salimi-Badr