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Rewriting systems are often defined as binary relations over a given set of objects. This simple definition is used to describe various properties of rewriting such as termination, confluence, normal forms etc. In this paper, we introduce a…

Logic in Computer Science · Computer Science 2011-06-01 Dominique Duval , Rachid Echahed , Frédéric Prost

In this work we produce a framework for constructing universal function approximators on graph isomorphism classes. We prove how this framework comes with a collection of theoretically desirable properties and enables novel analysis. We…

Data Structures and Algorithms · Computer Science 2020-10-27 Rickard Brüel-Gabrielsson

Many problems can be presented in an abstract form through a wide range of binary objects and relations which are defined over problem domain. In these problems, graphical demonstration of defined binary objects and solutions is the most…

Graphics · Computer Science 2016-03-24 Mohammadreza Ashouri , Ali Golshani , Dara Moazzmi , Mandana Ghasemi

Building upon [1], this study aims to introduce fractal geometry into graph theory, and to establish a potential theoretical foundation for complex networks. Specifically, we employ the method of substitution to create and explore…

Dynamical Systems · Mathematics 2024-05-29 Nero Ziyu Li

We study the first order theory of structures over graphs i.e. structures of the form ($\mathcal{G},\tau$) where $\mathcal{G}$ is the set of all (isomorphism types of) finite undirected graphs and $\tau$ some vocabulary. We define the…

Logic in Computer Science · Computer Science 2023-06-22 Ramanathan S. Thinniyam

Graph Transformers, which incorporate self-attention and positional encoding, have recently emerged as a powerful architecture for various graph learning tasks. Despite their impressive performance, the complex non-convex interactions…

Machine Learning · Computer Science 2024-06-05 Hongkang Li , Meng Wang , Tengfei Ma , Sijia Liu , Zaixi Zhang , Pin-Yu Chen

Given a collection of graphs $\mathbf{G}=(G_1, \ldots, G_m)$ with the same vertex set, an $m$-edge graph $H\subset \cup_{i\in [m]}G_i$ is a transversal if there is a bijection $\phi:E(H)\to [m]$ such that $e\in E(G_{\phi(e)})$ for each…

Combinatorics · Mathematics 2022-05-04 Richard Montgomery , Alp Müyesser , Yanitsa Pehova

Graphs constructed to translate some graph problem into another graph problem are usually called auxiliary graphs. Specifically total graphs of simple graphs are used to translate the total colouring problem of the original graph into a…

General Mathematics · Mathematics 2016-02-16 Ravi Goyal , Mahipal Jadeja , Rahul Muthu

We characterise the slices of the category of graphs that are algebraically universal in terms of the structure of the slicing graph. In particular, we show that algebraic universality is obtained if, and only if, the slicing graph contains…

Combinatorics · Mathematics 2023-10-06 Ioannis Eleftheriadis

Graph classes of bounded tree rank were introduced recently in the context of the model checking problem for first-order logic of graphs. These graph classes are a common generalization of graph classes of bounded degree and bounded…

Discrete Mathematics · Computer Science 2025-10-08 Jakub Gajarský , Rose McCarty

We show that viewing graphs as sets of node features and incorporating structural and positional information into a transformer architecture is able to outperform representations learned with classical graph neural networks (GNNs). Our…

Machine Learning · Computer Science 2021-06-11 Grégoire Mialon , Dexiong Chen , Margot Selosse , Julien Mairal

Recent advancements in graph learning have revolutionized the way to understand and analyze data with complex structures. Notably, Graph Neural Networks (GNNs), i.e. neural network architectures designed for learning graph representations,…

Machine Learning · Computer Science 2024-07-09 Yu Huang , Min Zhou , Menglin Yang , Zhen Wang , Muhan Zhang , Jie Wang , Hong Xie , Hao Wang , Defu Lian , Enhong Chen

We demonstrate that graph-based models are fully capable of representing higher-order interactions, and have a long history of being used for precisely this purpose. This stands in contrast to a common claim in the recent literature on…

Physics and Society · Physics 2026-02-20 Tiago P. Peixoto , Leto Peel , Thilo Gross , Manlio De Domenico

Bidirectional data accessors such as lenses, prisms and traversals are all instances of the same general 'optic' construction. We give a careful account of this construction and show that it extends to a functor from the category of…

Category Theory · Mathematics 2018-09-10 Mitchell Riley

Graph searching is one of the simplest and most widely used tools in graph algorithms. Every graph search method is defined using some particular selection rule, and the analysis of the corresponding vertex orderings can aid greatly in…

Discrete Mathematics · Computer Science 2021-09-07 Matjaž Krnc , Nevena Pivač

We propose Universal Causality, an overarching framework based on category theory that defines the universal property that underlies causal inference independent of the underlying representational formalism used. More formally, universal…

Artificial Intelligence · Computer Science 2022-07-08 Sridhar Mahadevan

In this paper, we propose an algebraic formalization of the two important classes of dynamic programming algorithms called forward and forward-backward algorithms. They are generalized extensively in this study so that a wide range of other…

Machine Learning · Computer Science 2017-02-23 Ai Azuma , Masashi Shimbo , Yuji Matsumoto

Graphlets are subgraphs rooted at a fixed vertex. The number of occurrences of graphlets aligned to a particular vertex, called graphlet degree sequence (gds), gives a topological description of the surrounding of the analyzed vertex.…

Combinatorics · Mathematics 2026-01-01 David Hartman , Aneta Pokorná , Daniel Trlifaj , Lluís Vena

Graph Neural Networks (GNNs) have demonstrated effectiveness in collaborative filtering tasks due to their ability to extract powerful structural features. However, combining the graph features extracted from user-item interactions and…

Information Retrieval · Computer Science 2024-08-13 Jiafeng Xia , Dongsheng Li , Hansu Gu , Tun Lu , Ning Gu

This paper considers the problem of embedding directed graphs in Euclidean space while retaining directional information. We model a directed graph as a finite set of observations from a diffusion on a manifold endowed with a vector field.…

Machine Learning · Statistics 2014-06-03 Dominique Perrault-Joncas , Marina Meila