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Graphs are essential representations of many real-world data such as social networks. Recent years have witnessed the increasing efforts made to extend the neural network models to graph-structured data. These methods, which are usually…

Machine Learning · Computer Science 2018-11-07 Yao Ma , Ziyi Guo , Zhaochun Ren , Eric Zhao , Jiliang Tang , Dawei Yin

As the use and diversity of diagrams across many disciplines grows, there is an increasing interest in the diagrams research community concerning how such diversity might be documented and explained. In this article, we argue that one way…

Computation and Language · Computer Science 2022-06-14 Tuomo Hiippala , John A. Bateman

The representation of complex systems as networks is inappropriate for the study of certain problems. We show several examples of social, biological, ecological and technological systems where the use of complex networks gives very limited…

Physics and Society · Physics 2013-04-02 Ernesto Estrada , Juan A. Rodriguez-Velazquez

Graphs have often been used to answer questions about the interaction between real-world entities by taking advantage of their capacity to represent complex topologies. Complex networks are known to be graphs that capture such non-trivial…

Machine Learning · Computer Science 2022-06-03 Gabriel Spadon , Jose F. Rodrigues-Jr

We propose that symbols are first and foremost external communication tools used between intelligent agents that allow knowledge to be transferred in a more efficient and effective manner than having to experience the world directly. But,…

Artificial Intelligence · Computer Science 2023-04-27 Daniel L. Silver , Tom M. Mitchell

Social relationships (e.g., friends, couple etc.) form the basis of the social network in our daily life. Automatically interpreting such relationships bears a great potential for the intelligent systems to understand human behavior in…

Computer Vision and Pattern Recognition · Computer Science 2018-07-03 Zhouxia Wang , Tianshui Chen , Jimmy Ren , Weihao Yu , Hui Cheng , Liang Lin

Graph-based signal processing techniques have become essential for handling data in non-Euclidean spaces. However, there is a growing awareness that these graph models might need to be expanded into `higher-order' domains to effectively…

Machine Learning · Computer Science 2024-04-15 Mustafa Hajij , Ghada Zamzmi , Theodore Papamarkou , Aldo Guzmán-Sáenz , Tolga Birdal , Michael T. Schaub

To better understand the structure and function of complex systems, researchers often represent direct interactions between components in complex systems with networks, assuming that indirect influence between distant components can be…

Physics and Society · Physics 2018-06-18 Renaud Lambiotte , Martin Rosvall , Ingo Scholtes

Representing structured text from complex documents typically calls for different machine learning techniques, such as language models for paragraphs and convolutional neural networks (CNNs) for table extraction, which prohibits drawing…

Computation and Language · Computer Science 2022-02-21 Thomas Roland Barillot , Jacob Saks , Polena Lilyanova , Edward Torgas , Yachen Hu , Yuanqing Liu , Varun Balupuri , Paul Gaskell

We demonstrate that graph-based models are fully capable of representing higher-order interactions, and have a long history of being used for precisely this purpose. This stands in contrast to a common claim in the recent literature on…

Physics and Society · Physics 2026-02-20 Tiago P. Peixoto , Leto Peel , Thilo Gross , Manlio De Domenico

Computational modeling plays an increasingly important role in neuroscience, highlighting the philosophical question of how computational models explain. In the context of neural network models for neuroscience, concerns have been raised…

Neurons and Cognition · Quantitative Biology 2021-04-15 Rosa Cao , Daniel Yamins

The proliferation of deep neural networks in various domains has seen an increased need for interpretability of these models. Preliminary work done along this line and papers that surveyed such, are focused on high-level representation…

Computation and Language · Computer Science 2022-08-17 Hassan Sajjad , Nadir Durrani , Fahim Dalvi

Graph neural networks are promising architecture for learning and inference with graph-structured data. Yet difficulties in modelling the ``parts'' and their ``interactions'' still persist in terms of graph classification, where graph-level…

Machine Learning · Computer Science 2020-06-30 Kai Zhang , Yaokang Zhu , Jun Wang , Jie Zhang , Hongyuan Zha

Many cognitive neuroscience studies use large feature sets to predict and interpret brain activity patterns. Feature sets take many forms, from human stimulus annotations to representations in deep neural networks. Of crucial importance in…

Neurons and Cognition · Quantitative Biology 2022-12-07 Anna A. Ivanova , Martin Schrimpf , Stefano Anzellotti , Noga Zaslavsky , Evelina Fedorenko , Leyla Isik

Neural networks have succeeded in many reasoning tasks. Empirically, these tasks require specialized network structures, e.g., Graph Neural Networks (GNNs) perform well on many such tasks, but less structured networks fail. Theoretically,…

Machine Learning · Computer Science 2020-02-18 Keyulu Xu , Jingling Li , Mozhi Zhang , Simon S. Du , Ken-ichi Kawarabayashi , Stefanie Jegelka

Humans communicate, receive, and store information using sequences of items -- from words in a sentence or notes in music to abstract concepts in lectures and books. The networks formed by these items (nodes) and the sequential transitions…

Physics and Society · Physics 2022-06-08 Christopher W. Lynn , Danielle S. Bassett

Deep learning has become the dominant approach for creating high capacity, scalable models across diverse data modalities. However, because these models rely on a large number of learned parameters, tightly couple feature extraction with…

Artificial Intelligence · Computer Science 2026-05-12 Adam Gould , Francesca Toni

Probabilistic topic modeling is a popular and powerful family of tools for uncovering thematic structure in large sets of unstructured text documents. While much attention has been directed towards the modeling algorithms and their various…

Information Retrieval · Computer Science 2014-12-01 Samuel Rönnqvist , Xiaolu Wang , Peter Sarlin

Recent studies on computer vision mainly focus on natural images that express real-world scenes. They achieve outstanding performance on diverse tasks such as visual question answering. Diagram is a special form of visual expression that…

Computer Vision and Pattern Recognition · Computer Science 2021-03-11 Shaowei Wang , LingLing Zhang , Xuan Luo , Yi Yang , Xin Hu , Jun Liu

In clinical artificial intelligence (AI), graph representation learning, mainly through graph neural networks (GNNs), stands out for its capability to capture intricate relationships within structured clinical datasets. With diverse data --…

Machine Learning · Computer Science 2023-12-13 Ruth Johnson , Michelle M. Li , Ayush Noori , Owen Queen , Marinka Zitnik