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-Background. Network neuroscience examines the brain as a complex system represented by a network (or connectome), providing deeper insights into the brain morphology and function, allowing the identification of atypical brain connectivity…

Neurons and Cognition · Quantitative Biology 2020-09-01 Mert Lostar , Islem Rekik

Progress in digital pathology is hindered by high-resolution images and the prohibitive cost of exhaustive localized annotations. The commonly used paradigm to categorize pathology images is patch-based processing, which often incorporates…

Computer Vision and Pattern Recognition · Computer Science 2022-07-19 Thomas Stegmüller , Behzad Bozorgtabar , Antoine Spahr , Jean-Philippe Thiran

We propose a new method for supervised learning. The hubNet procedure fits a hub-based graphical model to the predictors, to estimate the amount of "connection" that each predictor has with other predictors. This yields a set of predictor…

Methodology · Statistics 2016-08-22 Leying Guan , Zhou Fan , Robert Tibshirani

Network datasets appear across a wide range of scientific fields, including biology, physics, and the social sciences. To enable data-driven discoveries from these networks, statistical inference techniques like estimation and hypothesis…

Methodology · Statistics 2026-02-19 Arpan Kumar , Minh Tang , Srijan Sengupta

Heart diseases remain the leading cause of mortality worldwide, implying approximately 18 million deaths according to the WHO. In particular, heart failures (HF) press the healthcare industry to develop systems for their early, rapid, and…

Image and Video Processing · Electrical Eng. & Systems 2025-12-10 Andrés Bell-Navas , María Villalba-Orero , Enrique Lara-Pezzi , Jesús Garicano-Mena , Soledad Le Clainche

The rapid development of spatial transcriptomics (ST) offers new opportunities to explore the gene expression patterns within the spatial microenvironment. Current research integrates pathological images to infer gene expression, addressing…

Computer Vision and Pattern Recognition · Computer Science 2025-03-03 Junchao Zhu , Ruining Deng , Tianyuan Yao , Juming Xiong , Chongyu Qu , Junlin Guo , Siqi Lu , Yucheng Tang , Daguang Xu , Mengmeng Yin , Yu Wang , Shilin Zhao , Yaohong Wang , Haichun Yang , Yuankai Huo

Self-supervised learning methods overcome the key bottleneck for building more capable AI: limited availability of labeled data. However, one of the drawbacks of self-supervised architectures is that the representations that they learn are…

Machine Learning · Computer Science 2022-07-08 Avi Ziskind , Sujeong Kim , Giedrius T. Burachas

Test data measured by medical instruments often carry imprecise ranges that include the true values. The latter are not obtainable in virtually all cases. Most learning algorithms, however, carry out arithmetical calculations that are…

Machine Learning · Computer Science 2020-07-27 Mei Wang , Jianwen Su , Haiqin Lu

In recent years, studying and predicting alternative mobility (e.g., sharing services) patterns in urban environments has become increasingly important as accurate and timely information on current and future vehicle flows can successfully…

Machine Learning · Computer Science 2021-08-19 Stefano Fiorini , Michele Ciavotta , Andrea Maurino

We propose HookNet, a semantic segmentation model for histopathology whole-slide images, which combines context and details via multiple branches of encoder-decoder convolutional neural networks. Concentricpatches at multiple resolutions…

Image and Video Processing · Electrical Eng. & Systems 2020-06-23 Mart van Rijthoven , Maschenka Balkenhol , Karina Siliņa , Jeroen van der Laak , Francesco Ciompi

Recent advancements in image translation for enhancing mixed-exposure images have demonstrated the transformative potential of deep learning algorithms. However, addressing extreme exposure variations in images remains a significant…

Computer Vision and Pattern Recognition · Computer Science 2025-01-10 Shaurya Singh Rathore , Aravind Shenoy , Krish Didwania , Aditya Kasliwal , Ujjwal Verma

In accelerated MRI reconstruction, the anatomy of a patient is recovered from a set of under-sampled and noisy measurements. Deep learning approaches have been proven to be successful in solving this ill-posed inverse problem and are…

Image and Video Processing · Electrical Eng. & Systems 2023-03-20 Zalan Fabian , Berk Tinaz , Mahdi Soltanolkotabi

In recent years, transformer-based deep learning networks have gained popularity in Hyperspectral (HS) unmixing applications due to their superior performance. The attention mechanism within transformers facilitates input-dependent…

In high-speed flow past a normal shock, the fluid temperature rises rapidly triggering downstream chemical dissociation reactions. The chemical changes lead to appreciable changes in fluid properties, and these coupled multiphysics and the…

Computational Physics · Physics 2021-10-04 Zhiping Mao , Lu Lu , Olaf Marxen , Tamer A. Zaki , George E. Karniadakis

When applying machine learning to sensitive data, one has to find a balance between accuracy, information security, and computational-complexity. Recent studies combined Homomorphic Encryption with neural networks to make inferences while…

Machine Learning · Computer Science 2019-06-07 Alon Brutzkus , Oren Elisha , Ran Gilad-Bachrach

Technological advances in medical data collection, such as high-throughput genomic sequencing and digital high-resolution histopathology, have contributed to the rising requirement for multimodal biomedical modelling, specifically for…

Machine Learning · Computer Science 2024-10-29 Konstantin Hemker , Nikola Simidjievski , Mateja Jamnik

Reasoning over ultra-long documents requires synthesizing sparse evidence scattered across distant segments under strict memory constraints. While streaming agents enable scalable processing, their passive memory update strategy often fails…

Computation and Language · Computer Science 2026-02-04 Xinyu Wang , Mingze Li , Peng Lu , Xiao-Wen Chang , Lifeng Shang , Jinping Li , Fei Mi , Prasanna Parthasarathi , Yufei Cui

We present SurgeonAssist-Net: a lightweight framework making action-and-workflow-driven virtual assistance, for a set of predefined surgical tasks, accessible to commercially available optical see-through head-mounted displays (OST-HMDs).…

Computer Vision and Pattern Recognition · Computer Science 2021-07-15 Mitchell Doughty , Karan Singh , Nilesh R. Ghugre

While the volume of electronic health records (EHR) data continues to grow, it remains rare for hospital systems to capture dense physiological data streams, even in the data-rich intensive care unit setting. Instead, typical EHR records…

Machine Learning · Computer Science 2018-12-04 Satya Narayan Shukla , Benjamin M. Marlin

While deep learning has shown promise in improving the automated diagnosis of disease based on chest X-rays, deep networks may exhibit undesirable behavior related to shortcuts. This paper studies the case of spurious class skew in which…

Computer Vision and Pattern Recognition · Computer Science 2020-09-23 Sarah Jabbour , David Fouhey , Ella Kazerooni , Michael W. Sjoding , Jenna Wiens