Related papers: An open-source Bayesian atmospheric radiative tran…
We demonstrate the application of our 3D radiative transfer framework in the model atmosphere code PHOENIX/3D for a number of spectrum synthesis calculations for very different conditions. The 3DRT framework discussed in the previous papers…
In the era of the James Webb Space Telescope (JWST), the dramatic improvement in the spectra of exoplanetary atmospheres demands a corresponding leap forward in our ability to analyze them: atmospheric retrievals need to be performed on…
We apply Bayesian Additive Regression Tree (BART) principles to training an ensemble of small neural networks for regression tasks. Using Markov Chain Monte Carlo, we sample from the posterior distribution of neural networks that have a…
Thermal emission spectra provide key insights into the atmospheric composition and especially the temperature structure of an exoplanet. With broader wavelength coverage, sensitivity and higher resolution, JWST has enabled robust…
In the era of precision medicine, genome-wide epigenetic modifications offer rich data that could inform risk prediction. However, these data are high-dimensional and exhibit complex dependence structures, which makes it difficult to…
We report analysis of transit spectroscopy of the extrasolar planets WASP-12 b, WASP-17 b, and WASP-19 b using the Wide Field Camera 3 on the HST. We analyze the data for a single transit for each planet using a strategy similar in certain…
We present the easy-to-use, publicly available, Python package petitRADTRANS, built for the spectral characterization of exoplanet atmospheres. The code is fast, accurate, and versatile; it can calculate both transmission and emission…
We propose a simple yet powerful extension of Bayesian Additive Regression Trees which we name Hierarchical Embedded BART (HE-BART). The model allows for random effects to be included at the terminal node level of a set of regression trees,…
We consider the task of discovering gene regulatory networks, which are defined as sets of genes and the corresponding transcription factors which regulate their expression levels. This can be viewed as a variable selection problem,…
Exoplanet atmospheric retrieval is a computational technique widely used to infer properties of planetary atmospheres from remote spectroscopic observations. Retrieval codes typically employ Bayesian sampling algorithms or machine learning…
This paper introduces Type 2 Tobit Bayesian Additive Regression Trees (TOBART-2). BART can produce accurate individual-specific treatment effect estimates. However, in practice estimates are often biased by sample selection. We extend the…
It has been shown that spectroscopy of transiting extrasolar planets can potentially provide a wealth of information about their atmospheres. Herein, we set up the inverse problem in spectroscopic retrieval. We use non-linear optimal…
The study of dependence between random variables under external influences is a challenging problem in multivariate analysis. We address this by proposing a novel semi-parametric approach for conditional copula models using Bayesian…
Studying atmospheric escape from exoplanets can provide important clues about the formation and evolution of exoplanets. Observational evidence of atmospheric escape has been obtained through transit spectroscopy in strong spectral lines of…
In this paper a homomorphic filtering scheme is proposed to improve the estimation of the planet/star radius ratio in astronomical transit signals. The idea is to reduce the effect of the short-term earth atmosphere variations. A two-step…
Although it is an extremely effective, easy-to-use, and increasingly popular tool for nonparametric regression, the Bayesian Additive Regression Trees (BART) model is limited by the fact that it can only produce discontinuous output.…
This paper presents a novel Rapidly-exploring Adaptive Sampling Tree (RAST) algorithm for the adaptive sampling mission of a hybrid aerial underwater vehicle (HAUV) in an air-sea 3D environment. This algorithm innovatively combines the…
We present new functionality within PICASO, a state-of-the-art radiative transfer model for exoplanet and brown dwarf atmospheres, by developing a new pipeline that computes phase-resolved thermal emission (thermal phase curves) from…
With a scheduled launch in October 2018, the James Webb Space Telescope (JWST) is expected to revolutionise the field of atmospheric characterization of exoplanets. The broad wavelength coverage and high sensitivity of its instruments will…
We present TransitFit, a package designed to fit exoplanetary transit light-curves. TransitFit offers multi-epoch, multi-wavelength fitting of multi-telescope transit data. TransitFit allows per-telescope detrending to be performed…