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Being an unsupervised machine learning and data mining technique, biclustering and its multimodal extensions are becoming popular tools for analysing object-attribute data in different domains. Apart from conventional clustering techniques,…

Artificial Intelligence · Computer Science 2017-02-20 Dmitry I. Ignatov , Bruce W. Watson

Bi-clustering is a technique that allows for the simultaneous clustering of observations and features in a dataset. This technique is often used in bioinformatics, text mining, and time series analysis. An important advantage of…

Computation · Statistics 2023-02-09 Anastasiia Livochka , Ryan Browne , Sanjeena Subedi

Dimensionality reduction and clustering techniques are frequently used to analyze complex data sets, but their results are often not easy to interpret. We consider how to support users in interpreting apparent cluster structure on scatter…

Machine Learning · Computer Science 2021-11-08 Xander Vankwikelberge , Bo Kang , Edith Heiter , Jefrey Lijffijt

Pattern extraction algorithms are enabling insights into the ever-growing amount of today's datasets by translating reoccurring data properties into compact representations. Yet, a practical problem arises: With increasing data volumes and…

Information Retrieval · Computer Science 2018-07-05 Michael Behrisch , Robert Krueger , Fritz Lekschas , Tobias Schreck , Nils Gehlenborg , Hanspeter Pfister

The gradual patterns that model the complex co-variations of attributes of the form "The more/less X, The more/less Y" play a crucial role in many real world applications where the amount of numerical data to manage is important, this is…

Machine Learning · Computer Science 2020-05-25 Michaël Chirmeni Boujike , Jerry Lonlac , Norbert Tsopze , Engelbert Mephu Nguifo

Biclustering numerical data became a popular data-mining task in the beginning of 2000's, especially for analysing gene expression data. A bicluster reflects a strong association between a subset of objects and a subset of attributes in a…

Data Structures and Algorithms · Computer Science 2011-11-15 Mehdi Kaytoue , Sergei O. Kuznetsov , Juraj Macko , Wagner Meira , Amedeo Napoli

This article proposes a biconvex modification to convex biclustering in order to improve its performance in high-dimensional settings. In contrast to heuristics that discard a subset of noisy features a priori, our method jointly learns and…

Machine Learning · Statistics 2026-04-13 Sam Rosen , Eric C. Chi , Jason Xu

In many situations it is desirable to identify clusters that differ with respect to only a subset of features. Such clusters may represent homogeneous subgroups of patients with a disease, such as cancer or chronic pain. We define a…

Methodology · Statistics 2014-07-14 Qian Liu , Guanhua Chen , Michael R. Kosorok , Eric Bair

Traditional clustering methods are limited when dealing with huge and heterogeneous groups of gene expression data, which motivates the development of bi-clustering methods. Bi-clustering methods are used to mine bi-clusters whose subsets…

Computer Vision and Pattern Recognition · Computer Science 2020-05-13 Kaijie Xu , Witold Pedrycz , Zhiwu Li , Yinghui Quan , Weike Nie

Deep learning is computationally intensive, with significant efforts focused on reducing arithmetic complexity, particularly regarding energy consumption dominated by data movement. While existing literature emphasizes inference, training…

Machine Learning · Statistics 2025-06-09 Van Minh Nguyen , Cristian Ocampo , Aymen Askri , Louis Leconte , Ba-Hien Tran

Biclustering is a method for detecting homogeneous submatrices in a given observed matrix, and it is an effective tool for relational data analysis. Although there are many studies that estimate the underlying bicluster structure of a…

Methodology · Statistics 2021-07-16 Chihiro Watanabe , Taiji Suzuki

Motivation: Modelling methods that find structure in data are necessary with the current large volumes of genomic data, and there have been various efforts to find subsets of genes exhibiting consistent patterns over subsets of treatments.…

Machine Learning · Computer Science 2016-09-15 Kerstin Bunte , Eemeli Leppäaho , Inka Saarinen , Samuel Kaski

In this paper a novel biclustering algorithm based on artificial intelligence (AI) is introduced. The method called EBIC aims to detect biologically meaningful, order-preserving patterns in complex data. The proposed algorithm is probably…

Machine Learning · Computer Science 2018-07-27 Patryk Orzechowski , Moshe Sipper , Xiuzhen Huang , Jason H. Moore

Clustering consists of partitioning data objects into subsets called clusters according to some similarity criteria. This paper addresses a generalization called quasi-clustering that allows overlapping of clusters, and which we link to…

Artificial Intelligence · Computer Science 2020-02-13 Fred Glover , Said Hanafi , Gintaras Palubeckis

Biclustering, also known as co-clustering or two-way clustering, simultaneously partitions the rows and columns of a data matrix to reveal submatrices with coherent patterns. Incorporating background knowledge into clustering to enhance…

Optimization and Control · Mathematics 2026-02-24 Antonio M. Sudoso

Data matrix having different sets of entities in its rows and columns are known as two mode data or affiliation data. Many practical problems require to find relationships between the two modes by simultaneously clustering the rows and…

Data Structures and Algorithms · Computer Science 2018-07-23 Briti Deb , Indrajit Mukherjee

Dense retrieval, which aims to encode the semantic information of arbitrary text into dense vector representations or embeddings, has emerged as an effective and efficient paradigm for text retrieval, consequently becoming an essential…

Information Retrieval · Computer Science 2024-11-20 Zongmeng Zhang , Jinhua Zhu , Wengang Zhou , Xiang Qi , Peng Zhang , Houqiang Li

The search for sample-variable associations is an important problem in the exploratory analysis of high dimensional data. Biclustering methods search for sample-variable associations in the form of distinguished submatrices of the data…

Genomics · Quantitative Biology 2009-10-08 Andrey A. Shabalin , Victor J. Weigman , Charles M. Perou , Andrew B. Nobel

Boolean networks are dynamical models of disease development in which the activation levels of genes are represented by binary variables. Given a Boolean network, controls represent mutations or medical treatments that fix the activation…

Optimization and Control · Mathematics 2026-04-02 Kyungduk Moon , Kangbok Lee , Loïc Paulevé

Clustering is a fundamental data mining tool that aims to divide data into groups of similar items. Generally, intuition about clustering reflects the ideal case -- exact data sets endowed with flawless dissimilarity between individual…

Machine Learning · Computer Science 2016-01-25 Margareta Ackerman , Jarrod Moore