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The Vietoris-Rips filtration is a versatile tool in topological data analysis. It is a sequence of simplicial complexes built on a metric space to add topological structure to an otherwise disconnected set of points. It is widely used…

Computational Geometry · Computer Science 2013-03-07 Donald R. Sheehy

We study the influence of a graph parameter called modular-width on the time complexity for optimally solving well-known polynomial problems such as Maximum Matching, Triangle Counting, and Maximum $s$-$t$ Vertex-Capacitated Flow. The…

Data Structures and Algorithms · Computer Science 2018-04-27 Stefan Kratsch , Florian Nelles

Lattice reduction is a popular preprocessing strategy in multiple-input multiple-output (MIMO) detection. In a quest for developing a low-complexity reduction algorithm for large-scale problems, this paper investigates a new framework…

Information Theory · Computer Science 2019-12-16 Shanxiang Lyu , Jinming Wen , Jian Weng , Cong Ling

We present an algorithm for computing the barcode of the image of a morphisms in persistent homology induced by an inclusion of filtered finite-dimensional chain complexes. These algorithms make use of the clearing optimization and can be…

Algebraic Topology · Mathematics 2022-01-13 Ulrich Bauer , Maximilian Schmahl

Persistent homology is a fundamental tool in Topological Data Analysis. The associated algebraic structure is the persistence module, a sequence of vector spaces connected by linear maps. Persistence modules admit a complete and…

Algebraic Topology · Mathematics 2026-02-13 R. Gonzalez-Diaz , M. Soriano-Trigueros , A. Torras-Casas

Determining whether two graphs are isomorphic is a fundamental problem with practical applications in areas such as molecular chemistry or social network analysis, yet it remains a challenging task, with exact solutions often being…

The persistence barcode is a topological descriptor of data that plays a fundamental role in topological data analysis. Given a filtration of the space of data, a persistence barcode tracks the evolution of its homological features. In this…

Computational Geometry · Computer Science 2024-09-11 Salman Parsa , Bei Wang

In the field of topological data analysis, persistence modules are used to express geometrical features of data sets. The matching distance $d_\mathcal{M}$ measures the difference between $2$-parameter persistence modules by taking the…

Algebraic Topology · Mathematics 2023-12-08 Håvard Bakke Bjerkevik , Michael Kerber

We present a unified pipeline for univariate time series classification via complex networks and persistent homology. A time series is mapped to a graph through one of five constructions across three families (visibility (natural and…

Algebraic Topology · Mathematics 2026-05-05 İsmail Güzel

Binary embedding of high-dimensional data aims to produce low-dimensional binary codes while preserving discriminative power. State-of-the-art methods often suffer from high computation and storage costs. We present a simple and fast…

Information Theory · Computer Science 2016-01-26 Sung-Hsien Hsieh , Chun-Shien Lu , Soo-Chang Pei

A matrix-compression algorithm is derived from a novel isogenic block decomposition for square matrices. The resulting compression and inflation operations possess strong functorial and spectral-permanence properties. The basic observation…

Rings and Algebras · Mathematics 2022-11-01 Alexander Belton , Dominique Guillot , Apoorva Khare , Mihai Putinar

We present improved algorithms for short cycle decomposition of a graph. Short cycle decompositions were introduced in the recent work of Chu et al, and were used to make progress on several questions in graph sparsification. For all…

Data Structures and Algorithms · Computer Science 2019-01-15 Yang P. Liu , Sushant Sachdeva , Zejun Yu

The persistence diagram (PD) is an increasingly popular topological descriptor. By encoding the size and prominence of topological features at varying scales, the PD provides important geometric and topological information about a space.…

A dynamic graph algorithm is a data structure that answers queries about a property of the current graph while supporting graph modifications such as edge insertions and deletions. Prior work has shown strong conditional lower bounds for…

Data Structures and Algorithms · Computer Science 2023-01-30 Monika Henzinger , Ami Paz , A. R. Sricharan

This technical report introduces a novel approach to efficient computation in homological algebra over fields, with particular emphasis on computing the persistent homology of a filtered topological cell complex. The algorithms here…

Algebraic Topology · Mathematics 2017-10-18 Gregory Henselman , Robert Ghrist

Persistent homology is a popular method for computing topological features of (metric) data. Standard approaches based on the \v{C}ech or Rips filtration are stable under small perturbations of the data, but highly sensitive to outliers.…

Algebraic Topology · Mathematics 2026-02-27 Pepijn Roos Hoefgeest , Lucas Slot

Differential computation (DC) is a highly general incremental computation/view maintenance technique that can maintain the output of an arbitrary and possibly recursive dataflow computation upon changes to its base inputs. As such, it is a…

Databases · Computer Science 2022-08-02 Khaled Ammar , Siddhartha Sahu , Semih Salihoglu , M. Tamer Ozsu

For general complex or real 1-parameter matrix flows $A(t)_{n,n}$ and for time-invariant static matrices $A \in \CC_{n,n}$ alike, this paper considers ways to decompose matrix flows and single matrices globally via one constant matrix…

Numerical Analysis · Mathematics 2020-11-20 Frank Uhlig

We construct an algorithm for implementing the discrete wavelet transform by means of matrices in SO_2(R) for orthonormal compactly supported wavelets and matrices in SL_m(R), m > = 2, for compactly supported biorthogonal wavelets. We show…

Mathematical Software · Computer Science 2007-05-23 Eirik Fossgaard

We present a row reduction algorithm to compute the barcode decomposition of persistence modules. This algorithm dualises the standard persistence one and clarifies the symmetry between clear and compress optimisations.

Computational Geometry · Computer Science 2021-03-12 Barbara Giunti
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