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Designing RNA sequences that reliably adopt specified three-dimensional structures while maintaining thermodynamic stability remains challenging for synthetic biology and therapeutics. Current inverse folding approaches optimize for…

Automating design minimizes errors, accelerates the design process, and reduces cost. However, automating robot design is challenging due to recursive constraints, multiple design objectives, and cross-domain design complexity possibly…

Robotics · Computer Science 2026-01-21 Andrew Wilhelm , Nils Napp

The field of complex self-assembly is moving toward the design of multi-particle structures consisting of thousands of distinct building blocks. To exploit the potential benefits of structures with such `addressable complexity,' we need to…

Soft Condensed Matter · Physics 2015-06-02 William M. Jacobs , Aleks Reinhardt , Daan Frenkel

We study a sequence of independent one-shot non-cooperative games where agents play equilibria determined by a tunable mechanism. Observing only equilibrium decisions, without parametric or distributional knowledge of utilities, we aim to…

Computer Science and Game Theory · Computer Science 2025-11-10 Luke Snow , Vikram Krishnamurthy

Mobile system-on-chips (SoCs) are growing in their complexity and heterogeneity (e.g., Arm's Big-Little architecture) to meet the needs of emerging applications, including games and artificial intelligence. This makes it very challenging to…

Hardware Architecture · Computer Science 2021-05-20 Aryan Deshwal , Syrine Belakaria , Ganapati Bhat , Janardhan Rao Doppa , Partha Pratim Pande

Model merging has emerged as an effective approach to combine multiple single-task models into a multitask model. This process typically involves computing a weighted average of the model parameters without any additional training. Existing…

Machine Learning · Computer Science 2025-04-28 Lu Li , Tianyu Zhang , Zhiqi Bu , Suyuchen Wang , Huan He , Jie Fu , Yonghui Wu , Jiang Bian , Yong Chen , Yoshua Bengio

Multi-task learning, which optimizes performance across multiple tasks, is inherently a multi-objective optimization problem. Various algorithms are developed to provide discrete trade-off solutions on the Pareto front. Recently, continuous…

Machine Learning · Computer Science 2024-07-31 Weiyu Chen , James T. Kwok

Characterizing and optimizing nanoscopic heat engines require an appropriate understanding of the interplay between power, efficiency, entropy production and fluctuations. Despite significant recent advancements, including linear stochastic…

Statistical Mechanics · Physics 2025-11-07 Gustavo A. L. Forão , Jonas Berx , Carlos E. Fiore

The full optimization of a quantum heat engine requires operating at high power, high efficiency, and high stability (i.e. low power fluctuations). However, these three objectives cannot be simultaneously optimized - as indicated by the…

Quantum Physics · Physics 2023-05-04 Paolo Andrea Erdman , Alberto Rolandi , Paolo Abiuso , Martí Perarnau-Llobet , Frank Noé

It has been shown that dimension reduction methods such as PCA may be inherently prone to unfairness and treat data from different sensitive groups such as race, color, sex, etc., unfairly. In pursuit of fairness-enhancing dimensionality…

Machine Learning · Computer Science 2020-03-10 Mohammad Mahdi Kamani , Farzin Haddadpour , Rana Forsati , Mehrdad Mahdavi

Hedonic games model settings in which a set of agents have to be partitioned into groups which we call coalitions. In the enemy aversion model, each agent has friends and enemies, and an agent prefers to be in a coalition with as few…

Computer Science and Game Theory · Computer Science 2025-02-20 Martin Durand , Laurin Erlacher , Johanne Müller Vistisen , Sofia Simola

When dealing with a multi-objective optimization problem, obtaining a comprehensive representation of the set of Pareto optimal solutions can be computationally expensive. However, identifying the most representative solutions can be…

Optimization and Control · Mathematics 2026-03-23 Tommaso Giovannelli , Marcos Medeiros Raimundo , Luis Nunes Vicente

Optimizing NLP models for fairness poses many challenges. Lack of differentiable fairness measures prevents gradient-based loss training or requires surrogate losses that diverge from the true metric of interest. In addition, competing…

Computation and Language · Computer Science 2025-06-19 Soumyajit Gupta , Venelin Kovatchev , Anubrata Das , Maria De-Arteaga , Matthew Lease

In the multidimensional stable roommate problem, agents have to be allocated to rooms and have preferences over sets of potential roommates. We study the complexity of finding good allocations of agents to rooms under the assumption that…

Computer Science and Game Theory · Computer Science 2020-05-01 Niclas Boehmer , Edith Elkind

Strand displacement and tile assembly systems are designed to follow prescribed kinetic rules (i.e., exhibit a specific time-evolution). However, the expected behavior in the limit of infinite time--known as thermodynamic equilibrium--is…

Emerging Technologies · Computer Science 2017-09-26 David Doty , Trent A. Rogers , David Soloveichik , Chris Thachuk , Damien Woods

Biological processes that are able to discriminate between different molecules consume energy and dissipate heat. They operate at different levels of fidelity and speed, and as a consequence there exist fundamental trade-offs between these…

Statistical Mechanics · Physics 2025-02-28 Jonas Berx , Karel Proesmans

Fine-tuning has become the standard practice for adapting pre-trained models to downstream tasks. However, the impact on model robustness is not well understood. In this work, we characterize the robustness-accuracy trade-off in…

Machine Learning · Computer Science 2025-07-15 Kunyang Li , Jean-Charles Noirot Ferrand , Ryan Sheatsley , Blaine Hoak , Yohan Beugin , Eric Pauley , Patrick McDaniel

In today's global business market place, individual firms no longer compete as independent entities with unique brand names but as integral part of supply chain links. Key to success of any business is satisfying customer's demands on time…

Optimization and Control · Mathematics 2014-08-05 Nelson Christopher Dzupire , Yaw Nkansah-Gyekye

Machine learning models are deployed as a central component in decision making and policy operations with direct impact on individuals' lives. In order to act ethically and comply with government regulations, these models need to make fair…

Machine Learning · Computer Science 2023-11-28 Bogdan Ficiu , Neil D. Lawrence , Andrei Paleyes

In Multi-Task Learning (MTL), tasks may compete and limit the performance achieved on each other, rather than guiding the optimization to a solution, superior to all its single-task trained counterparts. Since there is often not a unique…

Machine Learning · Computer Science 2023-06-16 Nikolaos Dimitriadis , Pascal Frossard , François Fleuret
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