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The emerging field of Molecular Communication (MC) aims to characterize biological-based signaling environment through information that are encoded into molecules. Since the birth of this field, a number of different applications and…

Molecular Networks · Quantitative Biology 2021-07-28 Dixon Vimalajeewa , Sasitharan Balasubramaniam

We describe a mathematical modeling of the digestion in the small intestine. The main interest of our work is to consider, at the same time, different aspects of the digestion i.e. the transport of the bolus all along the intestine,…

Dynamical Systems · Mathematics 2011-11-22 Masoomeh Taghipoor , Philippe Lescoat , Christine Georgelin , Jean-René Licois , Guy Barles

In this work, we continue the modelling of the digestion in the small intestine, started in a previous article, by investigating the effects of dietary fibre. We recall that this model aims at taking into account the three main phenomena of…

Dynamical Systems · Mathematics 2012-12-13 Masoomeh Taghipoor , Guy Barles , Christine Georgelin , Jean-René Licois , Philippe Lescoat

Intercellular exchange networks are essential for the adaptive capabilities of populations of cells. While diffusional exchanges have traditionally been difficult to map, recent advances in nanotechnology enable precise probing of exchange…

Statistical Mechanics · Physics 2024-12-13 Luís C. F. Latoski , Andrea De Martino , Daniele De Martino

Integrated global food system analysis is hampered by the fragmentation of data among food types, processes, and scales. Studies also often neglect the connection to human metabolism -- the ultimate driver of food demand. Here we use a…

Physics and Society · Physics 2025-08-05 Maxwell Kaye , Graham K. MacDonald , Eric Galbraith

The regulation of metabolic activity by tuning enzyme expression levels is crucial to sustain cellular growth in changing environments. Metabolic networks are often studied at steady state using constraint-based models and optimization…

Molecular Networks · Quantitative Biology 2014-10-24 Steffen Waldherr , Diego A. Oyarzún , Alexander Bockmayr

An imbalance between energy intake and energy expenditure will lead to a change in body weight (mass) and body composition (fat and lean masses). A quantitative understanding of the processes involved, which currently remains lacking, will…

Tissues and Organs · Quantitative Biology 2015-05-13 Carson C. Chow , Kevin D. Hall

The galactose network is a complex system responsible for galactose metabolism. It has been extensively studied experimentally and mathematically at the unicellular level to broaden our understanding of its regulatory mechanisms at higher…

Molecular Networks · Quantitative Biology 2016-02-12 Tina M. Mitre , Anmar Khadra , Michael C. Mackey

Ecological systems are complex dynamical systems. Modelling efforts on ecosystems' dynamical stability have revealed that population dynamics, being highly nonlinear, can be governed by complex fluctuations. Indeed, experimental and field…

Dynamical Systems · Mathematics 2020-02-19 Lluís Alsedà , José Tomás Lázaro , Ricard Solé , Blai Vidiella , Josep Sardanyés

In making models for biological systems one expects to grasp the biology and be able to use ones intuition to predict the outcome. This paper is about the discrepancy between what is expected and what is the outcome of the analysis of the…

Populations and Evolution · Quantitative Biology 2024-04-05 Joost H. J. van Opheusden , Lia Hemerik

Obesity and being over-weight add to the risk of some major life threatening diseases. According to W.H.O., a considerable population suffers from these disease whereas poor nutrition plays an important role in this context. Traditional…

Human-Computer Interaction · Computer Science 2021-01-07 Muhammad Usman , Huanhuan Chen

Dietary intake data are routinely drawn upon to explore diet-health relationships. However, these data are often subject to measurement error, distorting the true relationships. Beyond measurement error, there are likely complex synergistic…

Machine Learning · Computer Science 2025-02-12 Dylan Spicker , Amir Nazemi , Joy Hutchinson , Paul Fieguth , Sharon I. Kirkpatrick , Michael Wallace , Kevin W. Dodd

We utilize dynamical modes as features derived from Continuous Glucose Monitoring (CGM) data to detect meal events. By leveraging the inherent properties of underlying dynamics, these modes capture key aspects of glucose variability,…

Machine Learning · Computer Science 2025-07-02 Ali Tavasoli , Heman Shakeri

Alterations in the human gut bacteriome can be associated with human health issues, such as type-2 diabetes and cardiovascular disease. Both external and internal factors can drive changes in the composition and in the interactions of the…

Molecular Networks · Quantitative Biology 2021-07-19 Samitha Somathilaka , Daniel P. Martins , Wiley Barton , Orla O'Sullivan , Paul D. Cotter , Sasitharan Balasubramaniam

During overflow metabolism, cells excrete glycolytic byproducts when growing under aerobic conditions in a seemingly wasteful fashion. While potentially advantageous for microbes with finite oxidative capacity, its role in higher organisms…

Digital food content could impact viewers' dietary health, with individuals with eating disorders being particularly sensitive to it. However, a comprehensive understanding of why and how these individuals interact with such content is…

Human-Computer Interaction · Computer Science 2025-09-16 Ryuhaerang Choi , Subin Park , Sujin Han , Jennifer G. Kim , Sung-Ju Lee

Ecological modelling of increasingly more complex microbial populations is necessary to reflect the highly functional and diverse behaviour inherent to many systems found in reality. Anaerobic digestion is one such process that has…

Dynamical Systems · Mathematics 2015-08-24 Tewfik Sari , Matthew J. Wade

Innovative, real-time solutions are needed to address the mismatch between the demand for and supply of critical information to inform and motivate diet and health-related behavior change. Research suggests that interventions using mobile…

Molecular communication (MC) is a new communication engineering paradigm where molecules are employed as information carriers. MC systems are expected to enable new revolutionary applications such as sensing of target substances in…

Emerging Technologies · Computer Science 2018-12-14 Vahid Jamali , Arman Ahmadzadeh , Wayan Wicke , Adam Noel , Robert Schober

People with diabetes need insulin delivery to effectively manage their blood glucose levels, especially after meals, because their bodies either do not produce enough insulin or cannot fully utilize it. Accurate insulin delivery starts with…

Systems and Control · Electrical Eng. & Systems 2024-11-21 Hanyu Zeng , Hui Ji , Pengfei Zhou
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