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Accurate sleep stage classification is significant for sleep health assessment. In recent years, several machine-learning based sleep staging algorithms have been developed , and in particular, deep-learning based algorithms have achieved…

Human coders assign standardized medical codes to clinical documents generated during patients' hospitalization, which is error-prone and labor-intensive. Automated medical coding approaches have been developed using machine learning…

Computation and Language · Computer Science 2022-09-13 Wei Sun , Shaoxiong Ji , Erik Cambria , Pekka Marttinen

Recently, self-supervised instance discrimination methods have achieved significant success in learning visual representations from unlabeled photographic images. However, given the marked differences between photographic and medical…

Image and Video Processing · Electrical Eng. & Systems 2022-04-18 Mohammad Reza Hosseinzadeh Taher , Fatemeh Haghighi , Michael B. Gotway , Jianming Liang

We present Token-UNet, adopting the TokenLearner and TokenFuser modules to encase Transformers into UNets. While Transformers have enabled global interactions among input elements in medical imaging, current computational challenges hinder…

Computer Vision and Pattern Recognition · Computer Science 2026-02-24 Louis Fabrice Tshimanga , Andrea Zanola , Federico Del Pup , Manfredo Atzori

Clinical Text Notes (CTNs) contain physicians' reasoning process, written in an unstructured free text format, as they examine and interview patients. In recent years, several studies have been published that provide evidence for the…

Computation and Language · Computer Science 2022-08-19 Hlynur D. Hlynsson , Steindór Ellertsson , Jón F. Daðason , Emil L. Sigurdsson , Hrafn Loftsson

Automatic medical image segmentation plays a critical role in scientific research and medical care. Existing high-performance deep learning methods typically rely on large training datasets with high-quality manual annotations, which are…

Image and Video Processing · Electrical Eng. & Systems 2021-11-17 Shanshan Wang , Cheng Li , Rongpin Wang , Zaiyi Liu , Meiyun Wang , Hongna Tan , Yaping Wu , Xinfeng Liu , Hui Sun , Rui Yang , Xin Liu , Jie Chen , Huihui Zhou , Ismail Ben Ayed , Hairong Zheng

Transfer learning has gained attention in medical image analysis due to limited annotated 3D medical datasets for training data-driven deep learning models in the real world. Existing 3D-based methods have transferred the pre-trained models…

Computer Vision and Pattern Recognition · Computer Science 2021-04-29 Eunji Jun , Seungwoo Jeong , Da-Woon Heo , Heung-Il Suk

Predicting disease trajectories from electronic health records (EHRs) is a complex task due to major challenges such as data non-stationarity, high granularity of medical codes, and integration of multimodal data. EHRs contain both…

Machine Learning · Computer Science 2025-02-26 Sifal Klioui , Sana Sellami , Youssef Trardi

Accurately diagnosing and predicting vehicle malfunctions is crucial for maintenance and safety in the automotive industry. While modern diagnostic systems primarily rely on sequences of vehicular Diagnostic Trouble Codes (DTCs) registered…

Artificial Intelligence · Computer Science 2026-02-03 Hugo Math , Rainer Lienhart

Medical coding is essential for standardizing clinical data and communication but is often time-consuming and prone to errors. Traditional Natural Language Processing (NLP) methods struggle with automating coding due to the large label…

Unsupervised pretraining is an integral part of many natural language processing systems, and transfer learning with language models has achieved remarkable results in many downstream tasks. In the clinical application of medical code…

Computation and Language · Computer Science 2022-06-03 Shaoxiong Ji , Matti Hölttä , Pekka Marttinen

Many recent studies use machine learning to predict a small number of ICD-9-CM codes. In practice, on the other hand, physicians have to consider a broader range of diagnoses. This study aims to put these previously incongruent evaluation…

Applications · Statistics 2020-06-25 Gil Alon , Elizabeth Chen , Guergana Savova , Carsten Eickhoff

Token-based transformer world models have shown strong performance in visual reinforcement learning, but often suffer from temporal inconsistency in long-horizon rollouts, including object duplication, disappearance, and transmutation. A…

Machine Learning · Computer Science 2026-05-27 Youngin Kim , Ray Sun , Inho Kim , Bumsoo Park , Hyun Oh Song

Clinical notes in electronic health records contain highly heterogeneous writing styles, including non-standard terminology or abbreviations. Using these notes in predictive modeling has traditionally required preprocessing (e.g. taking…

Machine Learning · Computer Science 2019-11-18 Jonas Kemp , Alvin Rajkomar , Andrew M. Dai

Transformer-based neural decoders have emerged as a promising approach to error correction coding, combining data-driven adaptability with efficient modeling of long-range dependencies. This paper presents a novel decoder architecture that…

Information Theory · Computer Science 2025-09-22 Chin Wa Lau , Xiang Shi , Ziyan Zheng , Haiwen Cao , Nian Guo

Manual medical image segmentation is subjective and suffers from annotator-related bias, which can be mimicked or amplified by deep learning methods. Recently, researchers have suggested that such bias is the combination of the annotator…

Computer Vision and Pattern Recognition · Computer Science 2023-06-29 Zehui Liao , Yutong Xie , Shishuai Hu , Yong Xia

Code pre-trained models (CodePTMs) have recently demonstrated a solid capacity to process various software intelligence tasks, e.g., code clone detection, code translation, and code summarization. The current mainstream method that deploys…

Software Engineering · Computer Science 2024-05-10 Qiushi Sun , Nuo Chen , Jianing Wang , Xiang Li , Ming Gao

The attention mechanism is a core component of the Transformer architecture. Beyond improving performance, attention has been proposed as a mechanism for explainability via attention weights, which are associated with input features (e.g.,…

Computation and Language · Computer Science 2025-08-15 Andrés Carvallo , Denis Parra , Peter Brusilovsky , Hernan Valdivieso , Gabriel Rada , Ivania Donoso , Vladimir Araujo

Recently, In-context Learning (ICL) has become a significant inference paradigm in Large Multimodal Models (LMMs), utilizing a few in-context demonstrations (ICDs) to prompt LMMs for new tasks. However, the synergistic effects in multimodal…

Machine Learning · Computer Science 2025-05-20 Yuchu Jiang , Jiale Fu , Chenduo Hao , Xinting Hu , Yingzhe Peng , Xin Geng , Xu Yang

Accurate segmentation of organs or lesions from medical images is crucial for reliable diagnosis of diseases and organ morphometry. In recent years, convolutional encoder-decoder solutions have achieved substantial progress in the field of…

Image and Video Processing · Electrical Eng. & Systems 2022-07-12 Bingzhi Chen , Yishu Liu , Zheng Zhang , Guangming Lu , Adams Wai Kin Kong