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Stochastic dynamics on sparse graphs and disordered systems often lead to complex behaviors characterized by heterogeneity in time and spatial scales, slow relaxation, localization, and aging phenomena. The mathematical tools and…

Disordered Systems and Neural Networks · Physics 2025-06-05 Mattia Tarabolo , Luca Dall'Asta

A wide variety of biological phenomena can be modeled by the collective activity of a population of individual units. A common strategy for simulating such a system, the population density approach, is to take the macroscopic limit and…

Numerical Analysis · Mathematics 2021-06-15 Ningyuan Wang , Daniel B Forger

During development, the mammalian brain differentiates into specialized regions with distinct functional abilities. While many factors contribute to functional specialization, we explore the effect of neuronal density on the development of…

Neurons and Cognition · Quantitative Biology 2010-04-14 Michael I. Ham , Vadas Gintautas , Marko A. Rodriguez , Ryan A. Bennett , Cara L. Santa Maria , Luis M. A. Bettencourt

This paper develops a novel statistical approach to characterize temporally localised cross-oscillatory interactions between channels in a functional brain network. Brain signals are generally nonstationary and the proposed framework uses…

Methodology · Statistics 2026-02-10 Haibo Wu , Marina I. Knight , Hernando Ombao

We analyse how the sampling dynamics of distributions evolve in score-based diffusion models using cross-fluctuations, a centered-moment statistic from statistical physics. Specifically, we show that starting from an unbiased isotropic…

Machine Learning · Computer Science 2026-05-04 Sai Niranjan Ramachandran , Manish Krishan Lal , Suvrit Sra

We propose a novel technique to assess functional brain connectivity in EEG/MEG signals. Our method, called Sparsely-Connected Sources Analysis (SCSA), can overcome the problem of volume conduction by modeling neural data innovatively with…

Methodology · Statistics 2010-08-05 Stefan Haufe , Ryota Tomioka , Guido Nolte , Klaus-Robert Mueller , Motoaki Kawanabe

Stellar active regions like spots and faculae can distort the shapes of spectral lines, inducing variations in the radial velocities that are often orders of magnitude larger than the signals from Earth-like planets. Efforts to mitigate…

Earth and Planetary Astrophysics · Physics 2024-10-17 Haochuan Yu , Suzanne Aigrain , Baptiste Klein , Michael Cretignier , Florian Lienhard , Stephen J. Roberts

We propose two ways of estimating the current source density (CSD) from measurements of voltage on a Cartesian grid with missing recording points using the inverse CSD method. The simplest approach is to substitute local averages (LA) in…

Quantitative Methods · Quantitative Biology 2009-03-16 Daniel K. Wojcik , Szymon Leski

The correlation length-scale next to the noise variance are the most used hyperparameters for the Gaussian processes. Typically, stationary covariance functions are used, which are only dependent on the distances between input points and…

Machine Learning · Computer Science 2017-10-30 Kevin Cremanns , Dirk Roos

Inverse problems, where the goal is to recover an unknown signal from noisy or incomplete measurements, are central to applications in medical imaging, remote sensing, and computational biology. Diffusion models have recently emerged as…

Machine Learning · Computer Science 2026-01-15 Shayan Mohajer Hamidi , En-Hui Yang , Ben Liang

A system of soft ellipsoid molecules confined between two planar walls is studied using classical Density Functional Theory (DFT). Both the isotropic and nematic phases are considered. The excess free energy is evaluated using two different…

Materials Science · Physics 2009-11-10 David Cheung , Friederike Schmid

A steadily increasing body of evidence suggests that the brain performs probabilistic inference to interpret and respond to sensory input and that trial-to-trial variability in neural activity plays an important role. The neural sampling…

Neurons and Cognition · Quantitative Biology 2017-07-07 Ilja Bytschok , Dominik Dold , Johannes Schemmel , Karlheinz Meier , Mihai A. Petrovici

The apparent stochasticity of in-vivo neural circuits has long been hypothesized to represent a signature of ongoing stochastic inference in the brain. More recently, a theoretical framework for neural sampling has been proposed, which…

Neurons and Cognition · Quantitative Biology 2017-03-14 Mihai A. Petrovici , Ilja Bytschok , Johannes Bill , Johannes Schemmel , Karlheinz Meier

Deep neural networks excel at function approximation, yet they are typically trained from scratch for each new function. On the other hand, Bayesian methods, such as Gaussian Processes (GPs), exploit prior knowledge to quickly infer the…

Modeling the behavior of coupled networks is challenging due to their intricate dynamics. For example in neuroscience, it is of critical importance to understand the relationship between the functional neural processes and anatomical…

Machine Learning · Computer Science 2021-04-20 Hongyuan You , Sikun Lin , Ambuj K. Singh

With our ability to record more neurons simultaneously, making sense of these data is a challenge. Functional connectivity is one popular way to study the relationship between multiple neural signals. Correlation-based methods are a set of…

Neurons and Cognition · Quantitative Biology 2017-06-09 Tiger W. Lin , Anup Das , Giri P. Krishnan , Maxim Bazhenov , Terrence J. Sejnowski

There is a neglected fact in the traditional machine learning methods that the data sampling can actually lead to the solution sampling. We consider this observation to be important because having the solution sampling available makes the…

Computer Vision and Pattern Recognition · Computer Science 2017-06-06 Shangzhen Luan , Baochang Zhang , Jungong Han , Chen Chen , Ling Shao , Alessandro Perina , Linlin Shen

Improving the efficiency of current neural networks and modeling them in biological neural systems have become popular research directions in recent years. Pulse-coupled neural network (PCNN) is a well applicated model for imitating the…

Computer Vision and Pattern Recognition · Computer Science 2026-01-01 Haoran Liu , Mingzhe Liu , Peng Li , Jiahui Wu , Xin Jiang , Zhuo Zuo , Bingqi Liu

Local field potentials (LFPs) are routinely measured experimentally in brain tissue, and exhibit strong low-pass frequency filtering properties, with high frequencies (such as action potentials) being visible only at very short distances…

Biological Physics · Physics 2016-08-16 C. Bédard , H. Kröger , A. Destexhe

In the past decade, the cell-type specific connectivity and activity of local cortical networks have been characterized experimentally to some detail. In parallel, modeling has been established as a tool to relate network structure to…

Neurons and Cognition · Quantitative Biology 2011-06-29 Tobias C. Potjans , Markus Diesmann
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