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The application of numerical techniques to the study of energy landscapes of large systems relies on sufficient sampling of the stationary points. Since the number of stationary points is believed to grow exponentially with system size, we…

Statistical Mechanics · Physics 2014-12-11 Dhagash Mehta , Ciaran Hughes , Michael Kastner , David J Wales

The kinetic Ising model on a n-isotopic chain is considered in the framework of Glauber dynamics. The chain is composed of N segments with n sites, each one occupied by a different isotope. Due to the isotopic mass difference, the n spins…

Statistical Mechanics · Physics 2015-06-24 L. L. Goncalves , M. Lopez de Haro , J. Taguena-Martinez

Free energy landscapes encode the kinetics, intermediates, and transition states that govern molecular processes and are thus a key target of single biomolecule research. Typical approaches to deriving optimal, error-minimizing,…

Biological Physics · Physics 2025-11-25 Oliver Cheng , Zosia Adamska , Michael P. Brenner , Megan C. Engel

There are many ways to generate a set of nodes on the sphere for use in a variety of problems in numerical analysis. We present a survey of quickly generated point sets on $\mathbb{S}^2$, examine their equidistribution properties,…

Numerical Analysis · Mathematics 2016-10-25 D. P. Hardin , T. J. Michaels , E. B. Saff

We describe a numerical study of the potential energy landscape for the two-dimensional XY model (with no disorder), considering up to 100 spins and CPU and GPU implementations of local optimization, focusing on minima and saddles of index…

Statistical Mechanics · Physics 2013-11-27 Dhagash Mehta , Ciaran Hughes , Mario Schröck , David J. Wales

We provide a numerical method for computing solutions to a free boundary problem arising from the equilibrium state of a floating drop. This numerical method is based on a Newton's method for the underlying nonlinear boundary value…

Fluid Dynamics · Physics 2026-02-12 Mason Mault , Ray Treinen

We investigate the emergence of finite-amplitude non-zonal flows on the sphere $\mathbb{S}^2$ arising from stationary solutions to the 2D Euler equations. By restricting the Laplace-Beltrami eigenspace to the invariant subspace of the…

Analysis of PDEs · Mathematics 2026-04-14 Yuri Cacchiò

This paper proposes a ridgeless kernel method for solving infinite-horizon, deterministic, continuous-time models in economic dynamics, formulated as systems of differential-algebraic equations with asymptotic boundary conditions (e.g.,…

General Economics · Economics 2025-10-30 Mahdi Ebrahimi Kahou , Jesse Perla , Geoff Pleiss

We present a class of simple algorithms that allows to find the reaction path in systems with a complex potential energy landscape. The approach does not need any knowledge on the product state and does not require the calculation of any…

Disordered Systems and Neural Networks · Physics 2018-02-28 Silvia Bonfanti , Walter Kob

We develop an extended Onsager real-cavity framework to describe the Casimir-Polder interaction of small molecules dissolved in dielectric liquids near planar interfaces. By analytically resolving the geometry of the cavity opening, we…

Soft Condensed Matter · Physics 2025-12-24 Johannes Fiedler , Drew F. Parsons

We prove the existence of a ground state positive solution of Schr\"odinger-Poisson systems in the plane of the form $$ -\Delta u + V(x)u + \frac{\gamma}{2\pi} \left(\log|\cdot| \ast u^2 \right)u = b |u|^{p-2}u \qquad\text{in}\…

Analysis of PDEs · Mathematics 2022-06-07 Riccardo Molle , Andrea Sardilli

We study the 1D pressureless Euler-Poisson equations with variable background states and nonlocal velocity alignment. Our main focus is the phenomenon of critical thresholds, where subcritical initial data lead to global regularity, while…

Analysis of PDEs · Mathematics 2025-05-07 Kunhui Luan , Changhui Tan , Qiyu Wu

Binary classification tasks with imbalanced classes pose significant challenges in machine learning. Traditional classifiers often struggle to accurately capture the characteristics of the minority class, resulting in biased models with…

Machine Learning · Computer Science 2025-10-10 Hossein Moosaei , Milan Hladík , Ahmad Mousavi , Zheming Gao , Haojie Fu

We develop a rigorous theoretical framework for principal manifold estimation that recovers a latent low-dimensional manifold from a point cloud observed in a high-dimensional ambient space. Our framework accommodates manifolds with…

Statistics Theory · Mathematics 2026-04-07 Kun Meng , Christopher Perez

We consider Backus's problem in geophysics. This consists in reconstructing a harmonic potential outside the Earth when the intensity of the related field is measured on the Earth's surface. Thus, the boundary condition is (severely)…

Analysis of PDEs · Mathematics 2021-08-30 Toru Kan , Rolando Magnanini , Michiaki Onodera

The structural dynamics of a biopolymer is governed by a process of diffusion through its conformational energy landscape. In pulling experiments using optical tweezers, features of the energy landscape can be extracted from the probability…

Biological Physics · Physics 2020-07-01 Sudeep Adhikari , K. S. D. Beach

We introduce a variational algorithm to simulate quantum many-body states based on a tree tensor network ansatz which releases the isometry constraint usually imposed by the real-space renormalization coarse-graining: This additional…

Statistical Mechanics · Physics 2014-10-08 Matthias Gerster , Pietro Silvi , Matteo Rizzi , Rosario Fazio , Tommaso Calarco , Simone Montangero

A nonperturbative analytical description of the SU(2)_1 quantum critical point in an explicitly dimerized two-leg spin-1/2 Heisenberg ladder is presented. It is shown that this criticality essentially coincides with that emerging in a…

Strongly Correlated Electrons · Physics 2009-10-31 Y. -J. Wang , A. A. Nersesyan

The Material Point Method (MPM) is a hybrid Eulerian-Lagrangian approach capable of simulating large deformation problems of history-dependent materials. While the MPM can represent complex and evolving material domains by using Lagrangian…

Geophysics · Physics 2019-10-01 Ezra Y. S. Tjung , Shyamini Kularathna , Krishna Kumar , Kenichi Soga

In this paper we explore the phase space structures governing isomerization dynamics on a potential energy surface with four wells and an index-2 saddle. For this model, we analyze the influence that coupling both degrees of freedom of the…

Chaotic Dynamics · Physics 2020-06-24 Víctor J. García-Garrido , Makrina Agaoglou , Stephen Wiggins