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Related papers: Polymer-induced microcolony compaction in early bi…

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Ample experimental evidence has been accumulated demonstrating that the formation of monodispersed colloids proceeds through a more complex mechanism, than the generally excepted diffusional "burst nucleation" process. Instead, the…

Materials Science · Physics 2010-09-22 Jongsoon Park , Vladimir Privman , Egon Matijevic

Evolution of the spatial arrangement of cells in a primary culture of cardiac tissue derived from newborn rats was studied experimentally over extended period. It was found that cells attract each other spontaneously to form a clustered…

Cell Behavior · Quantitative Biology 2009-11-13 Takahiro Harada , Akihiro Isomura , Kenichi Yoshikawa

The locomotion of swimming bacteria in simple Newtonian fluids can successfully be described within the framework of low Reynolds number hydrodynamics. The presence of polymers in biofluids generally increases the viscosity, which is…

Soft Condensed Matter · Physics 2019-08-12 Andreas Zöttl , Julia M. Yeomans

The dynamics of growth of bacterial populations has been extensively studied for planktonic cells in well-agitated liquid culture, in which all cells have equal access to nutrients. In the real world, bacteria are more likely to live in…

Populations and Evolution · Quantitative Biology 2017-11-01 Xinxian Shao , Andrew Mugler , Justin Kim , Ha Jun Jeong , Bruce Levin , Ilya Nemenman

Understanding interactions between microparticles and lipid membranes is of increasing importance, especially for unraveling the influence of microplastics on our health and environment. Here, we study how a short-ranged adhesive force…

Soft Condensed Matter · Physics 2017-10-11 Casper van der Wel , Doris Heinrich , Daniela J. Kraft

To provide insight into the basic properties of emerging structures when bacteria or other microorganisms conquer surfaces, it is crucial to analyze their growth behavior during the formation of thin films. In this regard, many theoretical…

Soft Condensed Matter · Physics 2025-05-23 Yuta Kuroda , Takeshi Kawasaki , Andreas M. Menzel

Nutrient gradients and limitations play a pivotal role in the life of all microbes, both in their natural habitat as well as in artificial, microfluidic systems. Spatial concentration gradients of nutrients in densely packed cell…

To study the compressional forces exerted by a bundle of living stiff filaments pressing on a surface, akin to the case of an actin bundle in filopodia structures, we have performed particulate Molecular Dynamics simulations of a grafted…

Soft Condensed Matter · Physics 2015-06-17 Sanoop Ramachandran , Jean-Paul Ryckaert

Bacterial biofilms, surface-attached communities of cells, are in some respects similar to colloidal solids; both are densely packed with non-zero yield stresses. However, unlike non-living materials, bacteria reproduce and die, breaking…

Soft Condensed Matter · Physics 2019-01-08 Arben Kalziqi , Siu Lung Ng , David Yanni , Gabi Steinbach , Brian K. Hammer , Peter J. Yunker

During development, organisms acquire three-dimensional shapes with important physiological consequences. While the basic mechanisms underlying morphogenesis are known in eukaryotes, it is often difficult to manipulate them in vivo. To…

Hypothesis: The macroscopic properties of polymer composites are governed by the dispersion and aggregation states of filler particles within a crosslinking matrix. Although curing transforms a liquid precursor into a solid network, its…

Soft Condensed Matter · Physics 2026-03-03 Yujiro Furuta , Rei Kurita

Using self-consistent field and density-functional theories, we first investigate colloidal self-assembling of colloid/polymer films confined between two soft surfaces grafted by polymers. With the increase of colloidal concentrations, the…

Soft Condensed Matter · Physics 2007-05-23 Chun-lai Ren , Yu-qiang Ma

Microorganisms are ubiquitous in nature and technology. They inhabit diverse environments ranging from small river tributaries and lakes to oceans, as well as wastewater treatment plants and food manufacturing. In many of these…

We use Brownian dynamics simulations and theory to study the over-damped spatiotemporal dynamics and pattern formation in a fluid-permeated array of equally spaced, active, elastic filaments that are pinned at one end and free at the other.…

Soft Condensed Matter · Physics 2024-12-31 Sonu Karayat , Prashant K. Purohit , L. Mahadevan , Arvind Gopinath , Raghunath Chelakkot

We investigate the effect of mobile polymer brushes on proteins embedded in biological membranes by employing both Asakura-Oosawa type of theoretical model and coarse-grained molecular dynamics simulations. The brush polymer-induced…

Soft Condensed Matter · Physics 2022-03-02 Anvy Moly Tom , Won Kyu Kim , Changbong Hyeon

In drying liquid films of polymer-colloid mixtures, the stratification in which polymers are placed on top of larger colloids is studied. It is often presumed that the formation of segregated polymer-colloid layers is solely due to the…

Soft Condensed Matter · Physics 2020-03-12 Kyoungmun Lee , Siyoung Q. Choi

Entropic repulsion between DNA ring polymers under confinement is the key mechanism governing the spatial segregation of bacterial chromosomes, although it remains incompletely understood how proteins aid the process of entropic…

Soft Condensed Matter · Physics 2021-12-23 Debarshi Mitra , Shreerang Pande , Apratim Chatterji

Cell walls define a cell shape in bacteria. They are rigid to resist large internal pressures, but remarkably plastic to adapt to a wide range of external forces and geometric constraints. Currently, it is unknown how bacteria maintain…

Soft Condensed Matter · Physics 2014-05-01 Ariel Amir , Farinaz Babaeipour , Dustin B. McIntosh , David R. Nelson , Suckjoon Jun

Bacteria are able to maintain a narrow distribution of cell sizes by regulating the timing of cell divisions. In rich nutrient conditions, cells divide much faster than their chromosomes replicate. This implies that cells maintain multiple…

Cell Behavior · Quantitative Biology 2015-07-28 Po-Yi Ho , Ariel Amir

The present paper proposes a novel method of quantification of the variation in biofilm architecture, in correlation with the alteration of growth conditions that include, variations of substrate and conditioning layer. The polymeric…

Biological Physics · Physics 2018-01-30 Suparna Dutta Sinha , Saptarshi Das , Sujata Tarafdar , Tapati Dutta
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