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A classical problem describing the collective motion of cells, is the movement driven by consumption/depletion of a nutrient. Here we analyze one of the simplest such model written as a coupled Partial Differential Equation/Ordinary…

Analysis of PDEs · Mathematics 2022-09-02 Pierre-Emmanuel Jabin , Benoît Perthame

We study a two-lane model of two-species of particles that perform biased diffusion. Extensive numerical simulations show that when bias q is strong enough oppositely drifting particles form some clusters that block each other. Coarsening…

Statistical Mechanics · Physics 2015-05-13 Adam Lipowski , Dorota Lipowska

Two new criteria, that involve the microscopic dynamics of the system, are proposed for the identification of clusters in continuum systems. The first one considers a residence time in the definition of the bond between pairs of particles,…

Soft Condensed Matter · Physics 2009-11-07 Luis A. Pugnaloni , Fernando Vericat

Granular materials are inherently out-of-equilibrium systems due to energy dissipation through inelastic collisions and friction. When driven by mechanical agitation such as vibration, they exhibit rich collective behaviors including…

Soft Condensed Matter · Physics 2026-05-01 Kai Kono , Hiroyuki Ebata , Shio Inagaki

We consider two minimal models of active fluid droplets that exhibit complex dynamics including steady motion, deformation, rotation and oscillating motion. First we consider a droplet with a concentration of active contractile matter…

Soft Condensed Matter · Physics 2016-12-20 Carl A. Whitfield , Rhoda J. Hawkins

Understanding the structural evolution of granular systems is a long-standing problem. A recently proposed theory for such dynamics in two dimensions predicts that steady states of very dense systems satisfy detailed-balance. We analyse…

Soft Condensed Matter · Physics 2023-08-16 Alex D. C. Myhill , Raphael Blumenfeld

Clusters appear in nature in a diversity of contexts, involving distances as long as the cosmological ones, and down to atoms and molecules and the very small nuclear size. They also appear in several other scenarios, in particular in…

Populations and Evolution · Quantitative Biology 2020-02-19 D. Bazeia , M. V. de Moraes , B. F. de Oliveira

The dynamics by iteration of a function on a compact metric space, sometimes called a cascade, can be extended to the dynamics of a closed relation on such a space. Here we apply this relation dynamics to study semiflows (and their relation…

Dynamical Systems · Mathematics 2023-07-11 Ethan Akin

We study the dynamics of two particles that interact only when in contact. In this sense, although not in every particular, the interactions mimic those in granular materials. The detailed solution of the dynamics allows an analysis of the…

Statistical Mechanics · Physics 2009-11-10 Alexandre Rosas , J. Buceta , Katja Lindenberg

Boolean networks are special types of finite state time-discrete dynamical systems. A Boolean network can be described by a function from an n-dimensional vector space over the field of two elements to itself. A fundamental problem in…

Quantitative Methods · Quantitative Biology 2013-07-03 Yi Ming Zou

We propose a clustering-based approach for identifying coherent flow structures in continuous dynamical systems. We first treat a particle trajectory over a finite time interval as a high-dimensional data point and then cluster these data…

Dynamical Systems · Mathematics 2022-12-27 Wai Ming Chau , Shingyu Leung

We introduce a modified model of random walk, and then develop two novel clustering algorithms based on it. In the algorithms, each data point in a dataset is considered as a particle which can move at random in space according to the…

Machine Learning · Computer Science 2008-10-31 Qiang Li , Yan He , Jing-ping Jiang

Cellular automata (CA) dynamics are ordered in terms of two global parameters, computable {\sl a priori} from the description of rules. While one of them (activity) has been used before, the second one is new; it estimates the average…

adap-org · Physics 2009-10-22 P. -M. Binder

Identification of the clusters from an unlabeled data set is one of the most important problems in Unsupervised Machine Learning. The state of the art clustering algorithms are based on either the statistical properties or the geometric…

Machine Learning · Computer Science 2018-01-04 Sambarta Dasgupta , Keivan Ebrahimi , Umesh Vaidya

Complex systems often have features that can be modeled by advanced mathematical tools [1]. Of special interests are the features of complex systems that have a network structure as such systems are important for modeling technological and…

Classical Physics · Physics 2019-06-13 Nikolay K. Vitanov , Kaloyan N. Vitanov , Zlatinka I. Dimitrova

We study the collective behaviour of an ensemble of coupled motile elements whose interactions depend on time and are alternatively attractive or repulsive. The evolution of interactions is driven by individual internal variables with…

Statistical Mechanics · Physics 2009-11-10 Damian H. Zanette , Alexander S. Mikhailov

To study discrete dynamical systems of different types --- deterministic, statistical and quantum --- we develop various approaches. We introduce the concept of a system of discrete relations on an abstract simplicial complex and develop…

Mathematical Physics · Physics 2010-11-10 Vladimir V. Kornyak

We study the appearance and properties of cluster crystals (solids in which the unit cell is occupied by a cluster of particles) in a two-dimensional system of self-propelled active Brownian particles with repulsive interactions.…

Statistical Mechanics · Physics 2017-09-06 Jean-Baptiste Delfau , Cristóbal López , Emilio Hernández-García

We introduce a dynamical system based on the vertices of Voronoi tessellations. This dynamical system acts on finite or discrete point sets in the plane, taking a point set to the vertex set of its Voronoi tessellation. We explore the…

Dynamical Systems · Mathematics 2007-12-24 Natalie Priebe Frank , Sean Hart

We propose a linear clustering process on a network consisting of two opposite forces: attraction and repulsion between adjacent nodes. Each node is mapped to a position on a one-dimensional line. The attraction and repulsion forces move…

Social and Information Networks · Computer Science 2022-09-26 Ivan Jokić , Piet Van Mieghem