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Related papers: Attention-based Clinical Note Summarization

200 papers

Neural network-based methods for abstractive summarization produce outputs that are more fluent than other techniques, but which can be poor at content selection. This work proposes a simple technique for addressing this issue: use a…

Computation and Language · Computer Science 2018-10-10 Sebastian Gehrmann , Yuntian Deng , Alexander M. Rush

Electronic Healthcare Records contain large volumes of unstructured data, including extensive free text. Yet this source of detailed information often remains under-used because of a lack of methodologies to extract interpretable content in…

Computation and Language · Computer Science 2018-07-10 M. Tarik Altuncu , Erik Mayer , Sophia N. Yaliraki , Mauricio Barahona

Sequence-to-sequence (seq2seq) network is a well-established model for text summarization task. It can learn to produce readable content; however, it falls short in effectively identifying key regions of the source. In this paper, we…

Computation and Language · Computer Science 2020-05-04 Sajad Sotudeh , Nazli Goharian , Ross W. Filice

The findings section of a radiology report is often detailed and lengthy, whereas the impression section is comparatively more compact and captures key diagnostic conclusions. This research explores the use of advanced abstractive…

Computation and Language · Computer Science 2025-06-23 Anindita Bhattacharya , Tohida Rehman , Debarshi Kumar Sanyal , Samiran Chattopadhyay

With widespread adoption of electronic health records, there is an increased emphasis for predictive models that can effectively deal with clinical time-series data. Powered by Recurrent Neural Network (RNN) architectures with Long…

Machine Learning · Statistics 2018-07-17 Huan Song , Deepta Rajan , Jayaraman J. Thiagarajan , Andreas Spanias

The recent adoption of Electronic Health Records (EHRs) by health care providers has introduced an important source of data that provides detailed and highly specific insights into patient phenotypes over large cohorts. These datasets, in…

There are now a multitude of AI-scribing solutions for healthcare promising the utilization of large language models for ambient documentation. However, these AI scribes still rely on one-shot, or few-shot prompts for generating notes after…

We propose an unsupervised graph-based ranking model for extractive summarization of long scientific documents. Our method assumes a two-level hierarchical graph representation of the source document, and exploits asymmetrical positional…

Computation and Language · Computer Science 2021-01-14 Yue Dong , Andrei Mircea , Jackie C. K. Cheung

Medical dialogue information extraction is becoming an increasingly significant problem in modern medical care. It is difficult to extract key information from electronic medical records (EMRs) due to their large numbers. Previously,…

Computation and Language · Computer Science 2023-03-14 Xinshi Wang , Daniel Tang

The rapid adoption of Electronic Health Records (EHRs) has been instrumental in streamlining administrative tasks, increasing transparency, and enabling continuity of care across providers. An unintended consequence of the increased…

Computation and Language · Computer Science 2024-04-02 Griffin Adams

Doctors often make diagonostic decisions based on patient's image scans, such as magnetic resonance imaging (MRI), and patient's electronic health records (EHR) such as age, gender, blood pressure and so on. Despite a lot of automatic…

Computer Vision and Pattern Recognition · Computer Science 2021-12-23 Cheng Jiang , Yihao Chen , Jianbo Chang , Ming Feng , Renzhi Wang , Jianhua Yao

Automatic ICD coding from clinical text is a critical task in medical NLP but remains hindered by the extreme long-tail distribution of diagnostic codes. Thousands of rare and zero-shot ICD codes are severely underrepresented in datasets…

Computation and Language · Computer Science 2025-11-19 Truong Vo , Weiyi Wu , Kaize Ding

Analyzing vast textual data and summarizing key information from electronic health records imposes a substantial burden on how clinicians allocate their time. Although large language models (LLMs) have shown promise in natural language…

We present a novel system providing summaries for Computer Science publications. Through a qualitative user study, we identified the most valuable scenarios for discovery, exploration and understanding of scientific documents. Based on…

Multimodal (MM) learning is emerging as a promising paradigm in biomedical artificial intelligence (AI) applications, integrating complementary modality, which highlight different aspects of patient health. The scarcity of large…

Artificial Intelligence · Computer Science 2025-12-01 Niccolo Marini , Zhaohui Liang , Sivaramakrishnan Rajaraman , Zhiyun Xue , Sameer Antani

Extracting information from electronic health records (EHR) is a challenging task since it requires prior knowledge of the reports and some natural language processing algorithm (NLP). With the growing number of EHR implementations, such…

Machine Learning · Computer Science 2019-08-02 Sanghyun Choi , Nikita Ivkin , Vladimir Braverman , Michael A. Jacobs

Automatic text summarization tools help users in biomedical domain to acquire their intended information from various textual resources more efficiently. Some of the biomedical text summarization systems put the basis of their sentence…

Computation and Language · Computer Science 2017-05-31 Milad Moradi , Nasser Ghadiri

Clinical coding is the task of assigning a set of alphanumeric codes, referred to as ICD (International Classification of Diseases), to a medical event based on the context captured in a clinical narrative. The latest version of ICD,…

Computation and Language · Computer Science 2022-03-11 Cansu Sen , Bingyang Ye , Javed Aslam , Amir Tahmasebi

The quest for seeking health information has swamped the web with consumers health-related questions. Generally, consumers use overly descriptive and peripheral information to express their medical condition or other healthcare needs,…

Computation and Language · Computer Science 2025-12-30 Abhishek Basu , Deepak Gupta , Dina Demner-Fushman , Shweta Yadav

Clinical concept extraction often begins with clinical Named Entity Recognition (NER). Often trained on annotated clinical notes, clinical NER models tend to struggle with tagging clinical entities in user queries because of the structural…

Information Retrieval · Computer Science 2019-12-25 Yue Zhao , John Handley